Using process diagrams for the graphical representation of biological networks

Article Abstract:

A study gives a detailed demonstration of how process diagrams can act as a vehicle for the graphical representation of biological networks. The process diagram used is a fully state transition-based diagram that can be translated into machine-readable forms such as the Systems Biology Mark-up Language (SBML) in a straightforward way.

Methods, Usage, Graphic methods

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Automatic generation of cellular reaction networks with Moleculizer 1.0

Article Abstract:

A stochastic simulator for intracellular biochemical systems, Moleculizer 1.0 is described with special treatment for protein complexes. The program automatically generates the networks of reactions, which arise from the large number of similar protein complexes that occur inside simulations.

Technology application, Protein research, Chemical reactions

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A partnership between biology and engineering

Article Abstract:

Potentially beneficial results of a partnership between systems biology and synthetic biology are explored. The partnership enables more sophisticated therapies and precise engineering of crop plants.

Forecasts, trends, outlooks, Forecasts and trends, Market trend/market analysis, Comparative analysis, Biosynthesis, Bioengineering, Systems biology

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