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Chemicals, plastics and rubber industries

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Structural flexibility of the d(CCAGTACTGG)(sub 2) B-DNA decamer and its complex with two polyamides

Article Abstract:

Molecular dynamics simulations of the d(CCAGTACTGG)(sub 2) B-DNA decamer alone and complexed with two polyamide ligands exhibit a distinct structural flexibility of the DNA. The DNA double helices are curved in the simulation constrating the x-ray determined structures.

Author: Winger, Rudolf H., Liedl, Klaus R., Hallbrucker, Andreas, Mayer, Erwin, Wellenzohn, Bernd, Flader, Wolfgang
Publisher: American Chemical Society
Publication Name: Journal of Physical Chemistry B
Subject: Chemicals, plastics and rubber industries
ISSN: 1520-6106
Year: 2001
Plastics Material and Resin Manufacturing, Plastics materials and resins, Polyamide Resins, Analysis, Molecular dynamics, Spectra, Structure, Polyamides

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Dynamics of DNA: BI and BII phosphate backbone transitions

Article Abstract:

It has been studied that the relaxation from BII state is much faster with high rate constants and depending on temperature. The structures of the B1 DNA seem similar to the x-ray crystallography than the all BII state.

Author: Liedl, Klaus R., Wellenzohn, Bernd, Loerting, Thomas, Trieb, Michael, Rauch, Christine, Wibowo, Fajar
Publisher: American Chemical Society
Publication Name: Journal of Physical Chemistry B
Subject: Chemicals, plastics and rubber industries
ISSN: 1520-6106
Year: 2004
Science & research, Biological Product (except Diagnostic) Manufacturing, Drugs, Deoxyribonucleic Acid, Research, DNA, X-ray crystallography, Genetic research, Dynamics, Dynamics (Mechanics)

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