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Chemicals, plastics and rubber industries

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Fluorescence study of DNA binding and bending by EcoRI DNA methyltransferase

Article Abstract:

The fluorescence anisotropy and fluorescence resonance energy transfer (FRET) techniques were applied to study the interaction between EcoRI DNA methyltransferase (M.EcoRI) and its target DNA in solution. The results showed that M.EcoRI had a higher binding affinity to the short dsDNA strand than to the long one, and its binding to DNA was primarily entropy-driven.

Author: Jun Wang, Baocheng Ma, Xiaohong Fang
Publisher: American Chemical Society
Publication Name: Journal of Physical Chemistry B
Subject: Chemicals, plastics and rubber industries
ISSN: 1520-6106
Year: 2006
Methyltransferases, Structure

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Selective interactions of a few acridinium derivatives with single strand DNA: Study of photophysical and DNA binding interactions

Article Abstract:

The study results of acridinium derivatives indicate that they exhibit high solubility in buffer medium and efficiently distinguish between ssDNA and dsDNA through changes in fluorescence intensity and could have applications in fluorescent probes to understand various DNA-ligand interactions.

Author: Ramaiah, Danaboyina, Kuruvilla, Elizabeth
Publisher: American Chemical Society
Publication Name: Journal of Physical Chemistry B
Subject: Chemicals, plastics and rubber industries
ISSN: 1520-6106
Year: 2007
Acridine

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Effects of zinc binding on the conformational distribution of the amyloid-[beta] peptide based on molecular dynamics simulations

Article Abstract:

The comparative analysis of the apo-peptide and the holo-peptide which provide evidence for influence of zinc binding on the conformational distribution of amyloid-[beta] monomer dramatically is presented.

Author: Jun Wang, Wei Wang, Jian Zhang, Wenfei Li, Yu Su, Meng Qin
Publisher: American Chemical Society
Publication Name: Journal of Physical Chemistry B
Subject: Chemicals, plastics and rubber industries
ISSN: 1520-6106
Year: 2007
Primary nonferrous metals, not elsewhere classified, Secondary nonferrous metals, Peptides, Protein binding, Molecular dynamics, Amyloid beta-protein, Zinc, Zinc (Metal)

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Subjects list: Research, Analysis, Fluorescence, DNA-ligand interactions, DNA binding, Chemical properties
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