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Design of siRNAs producing unstructured guide-RNAs results in improved RNA interference efficiency

Article Abstract:

A study describes a strong inverse correlation between the degree of guide-ribonucleic acid (RNA) secondary structure formation and gene silencing by small interfering (si)RNA. The analysis of the effect of the secondary structures of guide-RNA sequences on RNA interference (RNAi) efficiency provides a basis for better understanding RNA silencing pathways and improving the design of siRNAs.

Author: Kaufmann, Stefan H.E., Patzel, Volker, Rutz, Sascha, Dietrich, Isabell, Koberle, Christian
Publisher: Nature Publishing Co.
Publication Name: Nature Biotechnology
Subject: Business
ISSN: 1087-0156
Year: 2005
RNA interference

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Sequence-dependent stimulation of the mammalian innate immune response by synthetic siRNA

Article Abstract:

A study is conducted which reports that synthetic short interfering RNAs (siRNA) formulated in nonviral delivery vehicles can be potent inducers of interferons and inflammatory cytokines both in vivo in mice and in vitro in human blood. Putative immunostimulatory motifs have allowed the design of siRNAs that can mediate RNAi but induce minimal immune activation.

Author: MacLachlan, Ian, Judge, Adam D., Sood, Vandana, Shaw, Janet R., Fang, Dianne, McClintock, Kevin
Publisher: Nature Publishing Co.
Publication Name: Nature Biotechnology
Subject: Business
ISSN: 1087-0156
Year: 2005
RNA, Cytokines, Immune response

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Systematic identification of sense-antisense transcripts in mammalian cells

Article Abstract:

An experimental strategy that allows systematic identification of endogenous mRNA with long complementary regions to other transcripts is developed and applied to human normal mammary epithelial and breast cancer cells. The experiment revealed that when the antisense RNAs are specifically targeted, their corresponding mRNA levels significantly altered.

Author: Rosok, Oystein, Sioud, Mouldy
Publisher: Nature Publishing Co.
Publication Name: Nature Biotechnology
Subject: Business
ISSN: 1087-0156
Year: 2004
Messenger RNA, Genetic research

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Subjects list: Research, United States, Genetic aspects, Mammals
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