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Chemicals, plastics and rubber industries

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Size-expanded DNA bases: An ab initio study of their structural and electronic properties

Article Abstract:

Second-order Moller-Plesset perturbation theory and density functional theory (DFT) are used to investigate the structural and electronic properties of size-expanded DNA bases, xA, xC, xG, and xT, and their natural counterparts. The results show that natural and size-expanded bases have both nonplanar amino groups, but the latter also has nonplanar aromatic rings, and xG is easier to oxidize than G.

Author: Sumpter, Bobby G., Fuentes-Cabrera, Miguel, Wells, Jack C.
Publisher: American Chemical Society
Publication Name: Journal of Physical Chemistry B
Subject: Chemicals, plastics and rubber industries
ISSN: 1520-6106
Year: 2005
Tennessee, Analysis, Density functionals, Density functional theory, Structure, Perturbation (Mathematics)

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Interaction of thionin with DNA strands: intercalation versus external stacking

Article Abstract:

Interaction of thionin in a glycerol/water glass bound to DNA quadruplexes and DNA duplexes with pressure-tuning hole-burning spectroscopy at 2 k are investigated. Pressure-tuning hole-burning experiments using thionin as a probe and various short-stranded DNA chains as complex-forming partners are also reported.

Author: Friedrich, Josef, Hecht, Christoph, Chang, Ta-Chau
Publisher: American Chemical Society
Publication Name: Journal of Physical Chemistry B
Subject: Chemicals, plastics and rubber industries
ISSN: 1520-6106
Year: 2004
Spectrum analysis, Spectroscopy

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Subjects list: Research, DNA
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