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Annotation of bacterial and archaeal genomes: improving accuracy and consistency

Article Abstract:

The improvements in the protein families relating to special classes of proteins like transposable elements, transporters, regulatory proteins, and restriction enzymes, which would allow to accurately and automatically annotate prokaryotic genomes are reviewed.

Author: Overbeek, Ross, Meyer, Folker, Bartels, Daniela, Vonstein, Veronika
Publisher: American Chemical Society
Publication Name: Chemical Reviews
Subject: Chemistry
ISSN: 0009-2665
Year: 2007
Physiological aspects, Prokaryotes

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Plant genomic sequencing using gene-enriched libraries

Article Abstract:

Gene-enrichment techniques combined with other genome mapping and sequencing approaches used as a plant whole genome sequencing strategies for large and highly repetitive plant genomes are reviewed.

Author: Rabinowicz, Pablo D.
Publisher: American Chemical Society
Publication Name: Chemical Reviews
Subject: Chemistry
ISSN: 0009-2665
Year: 2007
Research and Development in the Physical, Engineering, and Life Sciences, Plant Genetics, Arabidopsis thaliana

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Protein annotation at genomic scale: the current status

Article Abstract:

The present status of procedures used for manual genome annotation as well as computational methods and software infrastructure for analyzing protein function at the genomic scale are reviewed.

Author: Frishman, Dmitrij
Publisher: American Chemical Society
Publication Name: Chemical Reviews
Subject: Chemistry
ISSN: 0009-2665
Year: 2007
Analysis, Technology application, Genetic research, Nucleotide sequencing

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Subjects list: Research, Genetic aspects, Genomes, Ribosomal RNA, Structure, Protein-protein interactions
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