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Metadynamics as a tool for exploring free energy landscapes of chemical reactions

Article Abstract:

The metadynamics is a relatively new molecular dynamics technique aimed to enhance the sampling of separated regions in phase space and map out the underlying free energy landscape as a function of a small number of underlying free energy landscape as a function of a small number of order parameters or collective variables. The role of metadynamics in the search of transition states, local minima, reaction paths, free energy profiles, and reaction coordinates among a growing list of alternative methods.

Author: Klein, Michael L., Ensuig, Bernd, De Vivo, Marco, Zhiwei Liu, Moore, Preston
Publisher: American Chemical Society
Publication Name: Accounts of Chemical Research
Subject: Science and technology
ISSN: 0001-4842
Year: 2006

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Nonadiabatic dynamics of condensed phase rate processes

Article Abstract:

A method based on the quantum-classical Liouville equation, which clearly prescribes the details of the coupling between the quantum and classical degrees of freedom is described. With the help of this machinery, the computation of rare constants of reactions involving quantum particles immersed in a classical bath is shown and the use of this method on a model for proton transfer in a molecular complex dissolved in a polar solvent is illustrated.

Author: Kapral, Raymond, Hanna, Gabriel
Publisher: American Chemical Society
Publication Name: Accounts of Chemical Research
Subject: Science and technology
ISSN: 0001-4842
Year: 2006
Canada, Usage, Quantum theory, Quantum mechanics, Adiabatic processes (Thermodynamics)

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Non-Born - Oppenheimer molecular dynamics

Article Abstract:

Electronically nonadiabatic or non-Born-Oppenheimer chemical processes (photodissociation, charge-transfer, etc.) involve a nonradiative change in the electronic state of the system. The concept of single-surface molecular dynamics trajectory is generalized to that of coupled-surface non Born - Oppenheimer trajectory that evolves semiclassically under the influence of two or more electronic states and their couplings.

Author: Truhlar, Donald G., Jasper, Ahren W., Nangia, Shikha, Chaoyuan Zhu
Publisher: American Chemical Society
Publication Name: Accounts of Chemical Research
Subject: Science and technology
ISSN: 0001-4842
Year: 2006
Chemical processes

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Subjects list: Methods, United States, Analysis, Observations, Molecular dynamics, Chemical reactions
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