| Applied and Environmental Microbiology 2005 |
| Title | Subject | Authors |
|---|
| 16S rRNA gene-based identification of midgut bacteria from field-caught Anopheles gambiae sensu lato and A. funestus mosquitoes reveals new species related to known insect symbionts. | Biological sciences | Jenny M. Lindh, Olle Terenius, Ingrid Faye |
| 16S rRNA gene-based oligonucleotide microarray for environmental monitoring of the betaproteobacterial order 'Rhodocyclales'. | Biological sciences | Michael Wagner, Angelika Lehner, Alexander Loy, Claudia Schulz, Sebastian Lucker, Christian Baranyi, Andreas Schopfer-Wendels, Kilian Stoecker |
| 16S rRNA sequences and differences in bacteria isolated from the Muztag Ata glacier at increasing depths. | Biological sciences | Shurong Xiang, Tandong Yao, Lizhe An, Bingliang Xu, Junxia Wang |
| A bile salt-resistant derivative of Bifidobacterium animals has an altered fermentation pattern when grown on glucose and maltose. | Biological sciences | Clara G. de los Reyes-Gavilan, Abelardo Margolles, Patricia Ruas-Madiedo, Ana Hernandez-Barranco |
| Ability of Shiga toxin-producing Escherichia coli and Salmonella spp. to survive in a desiccation model system in dry foods. | Biological sciences | Reiji Hiramatsu, Masakado Matsumoto, Kenji Sakae, Yutaka Miyazaki |
| A broad-host-range, generalized transducing phage (SN-T) acquires 16S rRNA genes from different genera of bacteria. | Biological sciences | Amy Beumer, Jayne B. Robinson |
| Abundance, activity, and community structure of pelagic methane-oxidizing bacteria in temperature lakes. | Biological sciences | Ingvar Sundh, David Bastviken, Lars J. Tranvik |
| Abundance and diversity of viruses in six Delaware soils. | Biological sciences | K. Eric Wommack, Kurt E. Williamson, Mark Radosevich |
| Abundances, identify, and growth state of Actinobacteria in mountain lakes of different UV transparency. | Biological sciences | Jakob Pernthaler, Falk Warnecke, Ruben Sommaruga, RajuHofer Sekar Julia S. |
| Abundant respirable ergot alkaloids from the common airborne fungus Aspergillus fumigatus. | Biological sciences | Daniel G. Panaccione, Christine M. Coyle |
| Accelerated sulfur cycle in coastal marine sediment beneath areas of intensive shellfish aquaculture. | Biological sciences | Kazuya Watanabe, Hiroki Asami, Masato Aida |
| Accumulation and fate of microorganisms and microspheres in biofilms formed in a pilot-scale water distribution system. | Biological sciences | Thor-Axel Stenstrom, Nicholas J. Ashbolt, Jonas Langmark, Michael V. Storey |
| Accumulation of polyhydroxyalkanoate from styrene and phenylacetic acid by Pseudomonas putida CA-3. | Biological sciences | Guy de Roo, Kevin E. O'Connor, Patrick G. Ward |
| A clp gene homologue belonging to the crp gene family globally regulates lytic enzyme production, antimicrobial activity, and biological control activity expressed by Lysobacter enzymogenes. | Biological sciences | Donald Y. Kobayashi, Ralph M. Reedy, Jeffery D. Palumbo, Jun-Ma Zhou, Gary Y. Yuen |
| Acquisition of resistance to extended-spectrum cephalosporins by Salmonella entirica subsp. enterica serovar Newport and Escherichia coli in the turkey poult intestinal tract. | Biological sciences | C. Poppe, L. C. Martin, C. L. Gyles, R. Reid-Smith, P. Boerlin, K. R. Forward, J. F. Prescott, S. A. McEwen |
| Activation of the protein kinase C1 pathway upon continuous heat stress in Saccharomyces cerevisiae is triggered by an intracellular increase in osmolarity due to trehalose accumulation. | Biological sciences | Stanley Brul, Frans M. Klis, Klaas J. Hellingwerf, Femke I.C. Mensonides, M. Joost Teixeira de Mattos |
| Active transport and accumulation of iodide by newly isolated marine bacteria. | Biological sciences | Seigo Amachi, Yasuyuki Muramatsu, Yukako Mishima, Hirofumi Shiniyama, Takaaki Fujii |
| Activity and composition of the denitrifying bacterial community respond differently to long-term fertilization. | Biological sciences | Laurent Philippot, Karin Enwall, Sara Hallin |
| Activity and diversity of methanogens in a petroleum hydrocarbon-contaminated aquifer. | Biological sciences | Josef Zeyer, William V. Sigler, Manuel Pesaro, Jutta Kleikemper, Silvina A. Pombo, Martin H. Schroth |
| Activity and phylogenetic diversity of bacterial cells with high and low nucleic acid content and electron transport system activity in an upwelling ecosystem. | Biological sciences | K. Longnecker, B.F. Sherr, E.B. Sherr |
| Adaptation of Corynebacterium glutamicum to ammonium limitation: A global analysis using transcriptome and proteome techniques. | Biological sciences | Alfred Puhler, Jorn Kalinowski, Reinhard Kramer, Andreas Burkovski, Andrea T. Huser, Maike Silberbach, Mathias Schafer |
| Adaptation of the yeast URA3 selection system to gram-negative bacteria and generation of a deltabetCDE Pseudomonas putida strain. | Biological sciences | Teca Calcagno Galvao, Victor de Lorenzo |
| Adaptive responses to oxygen stress in obligatory anaerobes Clostridium acetobutylicum and Clostridium aminovalericum. | Biological sciences | Toshihiro Watanabe, Shinji Kawasaki, Yusuke Watamura, Masaki Ono, Kouji Takeda, Youichi Niimura |
| Adhesion-aggregation and inactivation of Poliovirus 1 in groundwater stored in a hydrophobic container. | Biological sciences | Benoit Gassilloud, Christophe Gantzer |
| Adhesion of the entomopathogenic fungus Beauveria (Cordyceps) bassiana to substrata. | Biological sciences | Nemat O. Keyhani, Diane J. Holder |
| Adhesion of Vibrio cholerae to granular starches. | Biological sciences | Meir Broza, Hanan Gancz, Yechezkel Kashi, Orly Niderman-Meyer, Eyal Shimoni |
| Advantage provided by iron for Escherichia coli growth and cultivability in drinking water. | Biological sciences | Brice M.R. Appenzeller, Carolina Yanez, Frederic Jorand, Jean-Cluade Block |
| Agreement between theory and measurement in quantification of ammonia-oxidizing bacteria. | Biological sciences | Russell J. Davenport, Thomas P. Curtis, Ian M. Head, Gulnur Coskuner, Stuart J. Ballinger, Rheanne L. Pickering, Rosario Solera |
| Agrobacterium tumefaciens-mediated transformation of Aspergillus fumigatus: An efficient tool for insertional mutagenesis and targeted gene disruption. | Biological sciences | Janyce A. Sugui, Yun C. Chang, K.J. Kwon-Chung |
| A high-molecular-mass surface protein (Lsp) and methionine sulfoxide reductase B (MsrB) contribute to the ecological performance of Lactobacillus reuteri in the murine gut. | Biological sciences | Howard F. Jenkinson, Jens Walter, Walter P. Hammes, Christian Hertel, Gerald W. Tannock, Patrice Chagnaud, Diane M. Laoch, Fabio Dal Bello |
| A Lactobacillius acidophilus strain of human gastrointestinal microbiota origin elicits killing of enterovirulent Salmonella enterica serovar typhimurium by triggering lethal bacterial memberane damage. | Biological sciences | Alain L. Servin, Marie-Helene Coconnier-Polter, Vanessa Lievin-Le Moal |
| Algal species and light microenvironment in a low-pH, geothermal microbial mat community. | Biological sciences | M.J. Ferris, K.B. Sheehan, M. Kuhl, K. Cooksey, B. Wigglesworth-Cooksey, R. Harvey, J.M. Henson |
| Allelic variation of polymorphic locus lytB, encoding a choline-binding protein, from Streptococci of the mitis group. | Biological sciences | Jose L. Garcia, Miriam Moscoso, Virginia Obregon, Rubens Lopez, Ernesto Garcia |
| Allophanate hydrolase, not urease, functions in bacterial cyanuric acid metabolism. | Biological sciences | Michael J. Sadowsky, Lawrence P. Wackett, Nir Shapir, Gang Cheng |
| Alteration of leucine aminopeptidase from Streptomyces septatus TH-2 to phenylalanine aminopeptidase by site-directed mutagenesis. | Biological sciences | Masaki Iwabuchi, Yoshiko Uesugi, Tadashi Hatanaka, Jiro Arima |
| Alternative lactose catabolic pathway in lactococcus lactis IL1403. | Biological sciences | Jan Kok, Pierre Renault, Tamara Aleksandrzak-Pierkarczyk, Jacek Bardowski |
| A method adapting microarray technology for signature-tagged mutagenesis of Desulfovibrio desulfurians G20 and Shewanella oneidensis MR-1 in anaerobic sediment survival experiments. | Biological sciences | Lee R. Krumholz, Jennifer L. Groh, Jimmy D. Ballard, Quingwei Luo |
| Amoebae as training grounds for intracellular bacterial pathogens. | Biological sciences | Matthias Horn, Michael Wagner, Maelle Molmeret, Marina Santic, Yousef Abu Kwaik |
| Amplified expression of fructose 1,6-biophophatase in Corynebacterium glutamicum increases in vivo flux through the pentose phosphate pathway and lysine production on different carbon sources. | Biological sciences | Elmar Heinzle, Oskar Zelder, Christoph Wittmann, Judith Becker, Corinna Klopprogge |
| Amplified intergenic locus polymorphism as a basis for bacterial typing of Listeria spp. and Escherichia coli. | Biological sciences | Yechezkel Kashi, Eran Diamant, Yniv Palti, Riva Gur-Arie, Lilach Somer, Yael Danini-Poleg |
| Amylomaltase of Pyrobaculum acrophilum IM2 produces thermoreversible starch gels. | Biological sciences | Lubbert Dijkhuizen, Thijs Kaper, Boguslawa Talik, Thijs J. Ettema, Herman Bos, Marc J.E.C. van der Maarel |
| Anaerobic ammonia-oxidizing bacteria and related activity in Baltimore inner harbor sediment. | Biological sciences | Harold J. Schreier, Yossi Tal, Joy E.M. Watts |
| Anaerobic degradation of benzene, toluene, ethylbenzene, and o-xylene in sediment-free iron-reducing enrichment cultures. | Biological sciences | Rainer U. Meckenstock, Michael K. Jahn, Stefan B. Haderlein |
| Anaerobic degradation of benzene, toluene, ethylbenzene, and xylene compounds by Dechloromonas strain RCB. | Biological sciences | John D. Coates, Romy Chakraborty, Susan M. O'Connor, Emily Chan |
| Anaerobic microbial communities in Lake Pavin, a unique meromictic Lake in France. | Biological sciences | Anne-C. Lehours, Corinne Bardot, Aurelie Thenot, Didier Debroas, Gerard Fonty |
| Anaerobic nitrate-dependent oxidation of U(IV) oxide minerals by the chemolithoautotrophic bacterium Thiobacillus denitrificans. | Biological sciences | Harry R. Beller |
| An aflatoxin biosynthesis cluster gene encodes a novel oxidase required for conversion of versicolorin A to sterigmatocystin. | Biological sciences | Kenneth C. Ehrlich, Stephen M. Boue, Deepak Bhatnagar, Beverly Montalbano |
| Analyses of livestock production, waste storage, and pathogen levels and prevalences in farm manures. | Biological sciences | M.L. Hutchison, L.D. Walters, S.M. Avery, A. Moore, S.M. Munro |
| Analysis of fae and fhcD genes in Mono Lake, California. | Biological sciences | Mary E. Lidstrom, Olivier Nercessian, Marina G. Kalyuzhnaya, Ludmila Chistoserdova, Samantha B. Joye |
| Analysis of fluorescent protein expression in transformants of Rickettsia monacensis, an obligate intracellular tick symbiont. | Biological sciences | Ulrike G. Munderloh, Timothy J. Kurtti, Gerald D. Baldridge, Nicole Burkhardt, Michael J. Herron |
| Analysis of gene involved in arsenic resistance in Cynebacterium glutamicum ATCC 13032. | Biological sciences | Jose A. Gil, Efren Ordonez, Michal Letek, Noelia Valbuena Jose, Luis M. Mateos |
| Analysis of methane monooxygenase genes in mono lake suggests that increased methane oxidation activity may correlate with a change in methanotroph community structure. | Biological sciences | J. Colin Murrell, Hendrik Schafer, Ian R. McDonald, Johannes C.M. Scholten, Ju-Ling Lin, Samantha B. Joye |
| Analysis of the hupSL operon of the nonheterocystous cyanobacterium lyngbya majuscula CCAP 1446/4: Regulation of transcription and expression under a light-dark regimen. | Biological sciences | Pedro Moradas-Ferreira, Elsa Leitao, Fredrik Oxelfelt, Paula Oliveira, Paula Tamagnini |
| An ergot alkaloid biosynthesis gene and clustered hypothetical genes from Aspergillus fumigatus. | Biological sciences | Daniel G. Panaccione, Christine M. Coyle |
| A novel real-time PCR for Listeria monocytogenes that monitors analytical performance via an internal amplification control. | Biological sciences | David Rodriguez-Lazaro, Mariela Scortti, Maria Pla, Hector J. Monzo, Jose A. Vazquez-Boland |
| Antagonistic interactions among marine bacteria impede the proliferation of Vibrio cholerae. | Biological sciences | Farooq Azam, Richard A. Long, David C. Rowley, Eric Zamora, Jiayuan Liu, Douglas H. Bartlett |
| Antagonists of Hsp16.3, a low-molecular-weight mycobacterial chaperone and virulence factor, derived from phage-displayed peptide libraries. | Biological sciences | Abhik Saha, Archna Sharma, Amlanjyoti Dhar, Bhabatarak Bhattacharyya, Siddhartha Roy Roy, Sujoy K. Das Gupta |
| Antimicrobial action of carvacrol at different stages of dual-species biofilm development by Staphylococcus aureus and Salmonella enterica seovar Typhimurium. | Biological sciences | S. Roller, J.R. Knowles, D.B. Murray, A.S. Naidu |
| Antimicrobial resistance and virulence genes of Escherichia coli isolates from swine in Ontario. | Biological sciences | Patrick Boerlin, Marie Archambault, Rebeccah Travis, Robert Friendship, Carlton L. Gyles, Scott A. McEwen, Richard Reid-Smith, Vivian Nicholson, Nicol Janecko, Heather Lim |
| Antimicrobial resistance profiles of Campylobacter jejuni isolates from wild birds in Sweden. | Biological sciences | Bjorn Olsen, Dennis Hasselquist, Jonas Waldenstrom, Tina Broman, Dik Mevius, Kees Veldman |
| A persistent, productive and seasonally dynamic vibriophage population within Pacific oysters (Crassostrea gigas). | Biological sciences | Curtis A. Suttle, Andre M. Comeau, Enrico Buenaventura |
| Aphid-symbiotic bacteria cultured in insect cell lines. | Biological sciences | A.C. Darby, S.M. Chandler, S.C. Welburn, A.E. Douglas |
| Application of a newly developed ARB software-integrated tool for in silico terminal restriction fragment length polymorphism analysis reveals the dominance of a novel pmoA cluster in a forest soil. | Biological sciences | Gesche Braker, Steffen Kolb, Peter Ricke |
| Application of a pH-sensitive fluoroprobe (C-SNARF -4) for pH microenvironment analysis in Pseudomonas aeruginosa biofilms. | Biological sciences | Terry J. Beveridge, Ryan C. Hunter |
| Application of cation-coated filter method to detection of noroviruses, enteroviruses, adenoviruses, and torque teno viruses in the Tamagawa River in Japan. | Biological sciences | Kumiko Oguma, Hiroyuki Katayama, Shinichiro Ohgaki, Eiji Haramoto |
| Application of fluorescent amplified fragment length polymorphism for comparison of human and animal isolates of Yersinia enterocolitica. | Biological sciences | Diane G. Newell, Georgina Manning, Catherine Fearnley, Stephen L.W. On, Branko Kokotovic, Tom Cheasty |
| Application of measurements of transepithelial electrical resistance of intestinal epithelial cell monolayers to evaluate probiotic activity. | Biological sciences | Birgitte Bjorn Budde, Trine Dano Klingberg, Maja Herold Pedersen, Avrelija Cencic |
| Application of stereolithographic custom models for studying the impact of biofilms and mineral precipitation on fluid flow. | Biological sciences | D.L. Stoner, S.M. Watson, R.D. Stedfeld, P. Meakin, L.K. Griffel, T.L. Tyler, L.M. Pegram, J.M. Barnes, V.A. Deason |
| Application of the BPEC pathway for large-scale biotechnological production of poly(3-mercaptopropionate) by recombinant Escherichia coli, including a novel in situ isolation method. | Biological sciences | Alexander Steinbuchel, Tina Lutke-Eversloh, Nehal Thakor |
| Application of the Synechococcus nirA promoter to establish an inducible expression system for engineering the Synechocystis tocopherol pathway. | Biological sciences | Steven C. Slater, Henry E. Valentin, Qungang Qi, Ming Hao, Wing-on Ng, Susan R. Baszis, James D. Weiss |
| A propionate-inducible expression system for enteric bacteria. | Biological sciences | Jay D. Keasling, Sung Kuk Lee |
| Aquaporin expression and freeze tolerance in Candida albicans. | Biological sciences | Peter Agre, Johan M. Thevelein, An Tanghe, Patrick Van Dijck, Jennifer M. Carbrey |
| Architecture of a nascent Sphingomonas sp. biofilm under varied hydrodynamic conditions. | Biological sciences | M. Hausner, V.P. Venugopalan, M. Kuehn, D. Springael, P.A. Wilderer, S. Wuertz |
| Artificial neural network prediction of viruses in shellfish. | Biological sciences | Rosina Girones, David Lees, Gail Brion, Chandramouli Viswanathan, T.R. Neelakantan, Apostolos Vantarakis, Srinivasa Lingireddy, Annika Allard |
| Ascending migration of endophytic rhizobia, from roots to leaves, inside rice plants and assessment of benefits to rice growth physiology. | Biological sciences | Frank B. Dazzo, Feng Chi, Shi-Hua Shen, Hai-Ping Cheng, Yu-Xiang Jing, Youssef G. Yanni |
| A second 5-carboxyvanillate decarboxylase gene, ligW2, is important for lignin-related biphenyl catabolism in Sphingomonas paucimobilis SYK-6. | Biological sciences | Eiji Masai, Yoshihiro Katayama, Masao Fukuda, Xue Peng, Daisuke Kasai, Keisuke Miyauchi |
| Aspergillus parasiticus cyclase catalyzes two dehydratin steps in aflatoxin biosynthesis. | Biological sciences | Emi Sakuno, Kimiko Yabe, Hiromitsu Nakajima, Ying Wen, Hidemi Hatabayashi, Hatsue Arai, Chiemi Aoki |
| Assessment of cyr1 gene contents of Bacillus thuringiensis strains by use of DNA microarrays . | Biological sciences | Luke Masson, Roland Brousseau, Alejandra Bravo, Jaroslaw Letowski |
| Assessment of elasticity and topography of Aspergillus nidulans spores via atomic force microscopy. | Biological sciences | David Schaefer, Liming Zhao, Mark R. Marten |
| Assessment of genotypic diversity of antibiotic-producing Pseudomonas species in the rhizosphere by denaturing gradient gel electrophoresis. | Biological sciences | J.M. Raaijmakers, M. Bergsma-Vlami, M.E. Prins, M. Staats |
| Assessment of the ability of the bioelectric effect to eliminate mixed-species biofilms. | Biological sciences | Mark E. Shirtliff, Alex Bargmeyer, Anne K. Camper |
| Assimilation of polysaccharides and glucose by major bacterial groups in the Delaware Estuary. | Biological sciences | Matthew T. Cottrell, David L. Kirchman, Rex R. Malmstrom, Hila Elifantz |
| Association of Cryptosporidium parvum with suspended particles: Impact on oocyst sedimentation. | Biological sciences | Edward R. Atwill, Kristin E. Searcy, Aaron I. Packman, Thomas Harter |
| At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies. | Biological sciences | Kevin E. Ashelford, John C. Fry, Andrew J. Weightman, Nadia A. Chuzhanova, Antonia J. Jones |
| Autotrophic ammonia-oxidizing bacteria contribute minimally to nitrification in a nitrogen-impacted forested ecosystem. | Biological sciences | Lisa Y. Stein, Fiona L. Jordan, J. Jason L. Cantera, Mark E. Fenn |
| Autotrophic and mixotrophic hydrogen photoproduction in sulfur-deprived Chlamydomonas cells . | Biological sciences | Laurent Cournac, Thomas Happe, Gilles Peltier, Swanny Fouchard, Anja Hemschemeier, Amandine Caruanna, Jeremy Pruvost, Jack Legrand |
| Azopirillum brasilense produces the auxin-like phenylacetic acid by using the key enzyme for indole-3-acetic acid biosynthesis. | Biological sciences | E. Somers, M. Srinivasan, D. Ptacek, J. Vanderleyden |
| Bacillus subtilis alpha-phosphoglucomutase is required for normal cell morphology and biofilm formation. | Biological sciences | Sierd Bron, Dimitri Karamata, Valdimir Lazarevic, Blazenka Soldo, Noel Medico, Harold Pooley |
| Bacteria associated with spores of the Arbuscular Mycorrhizal fungi Glomus geosporum and Glomus constrictum. | Biological sciences | Kurt Ineichen, Andres Wiemken, David Roesti, Olivier Braissant, Dirk Redecker, Michel Aragno |
| Bacterial community composition in Lake Tanganyika: Vertical and horizontal heterogeneity. | Biological sciences | Pierre-Denis Plisnier, Aaike De Wever, Koenraad Muylaert, Katleen Van der Gucht, Wim Vyverman, Samuel Pirlot, Christine Cocquyt, Jean-Pierre Descy |
| Bacterial community dynamics and polycyclic aromatic hydrocarbon degradation during bioremediation of heavily creosote-contaminated soil. | Biological sciences | Jordi Sabate, Anna M. Solanas, Marc Vinas, Maria Jose Espuny |
| Bacterial degradation of cyanide and its metal complexes under alkaline conditions. | Biological sciences | Rafael Blasco, Francisco Castillo, Victor M. Lugue-Almagro, Maria-J. Huertas, Manuel Martinez-Lugue, Conrado Moreno-Vivian, M. Dolores Roldan, L. Jesus Garcia-Gil |
| Bacterial populations active in metabolism of C1 compounds in the sediment of lake Washington, a freshwater lake. | Biological sciences | Mary E. Lidstrom, Olivier Nercessian, Emma Noyes, Marina G. Kalyuzhnaya, Ludmila Chistoserdova |
| Bactericidal actions of a silver ion solution on Escherichia coli, studied by energy-filtering transmission electron microscopy and proteomic analysis. | Biological sciences | Mikihiro Yamanaka, Keita Hara, Jun Kudo |
| Bacteriocin from honeybee beebread Enterococcus avium, active against Listeria monocytogenes. | Biological sciences | M. Carina Audisio, Horacio R. Terzolo, Maria C. Apella |
| Bacteriocin (mutacin) production by Streptococcus mutans genome sequence reference strain UA159: Elucidation of the antimicrobial repertoire by genetic dissection. | Biological sciences | John R. Tagg, Ralph W. Jack, John D.F. Hale, Yi-Tian Ting, Nicholas C.K. Heng |
| Bacteriophages may bias outcome of bacterial enrichment cultures. | Biological sciences | Francisco Lucena, Juan Jofre, Anicet R. Blanch, Maite Muniesa |
| Bacteriophage therapy to reduce Campylobacter jejuni colonization of broiler chickens. | Biological sciences | E. Dillon, A. Scott, A. El-Shibiny, I.F. Connerton, P.L. Connerton, C. Loc Carrillo, R.J. Atterbury |
| Balamuthia mandrillaris, free-living ameba and opportunistic agent of encephalitis, is a potential host for Legionella pneumophila bacteria. | Biological sciences | Winlet Sheba Shadrach, Kerstin Rydzewski, Ulrike Laube, Gudrun Holland, Antje Flieger, Muhsin Ozel, Albrecht F. Kiderlen |
| Beringian paleoecology inferred from permafrost-preserved fungal DNA. | Biological sciences | Peter Arctander, Magnus C. Lydolph, Jonas Jacobsen, M. Thomas P. Gilbert, David A. Gilichinsky, Anders J. Hansen, Eske Willerslev, Lene Lange |
| Bias in the Listeria monocytogens enrichment procedure: Lineage 2 strains outcompete lineage 1 strains in University of Vermont selective enrichments. | Biological sciences | Birte Fonnesbech Vogel, Lone Gram, Jesper Bartholin Bruhn |
| Bifidobacterium longum endogalactanase liberates galactotriose from type I galactans. | Biological sciences | Sandra W.A Hinz, Marieke I. Pastink, Lambertus A.M. van den Broek, Jean-Paul Vincken, Alphons G.J. Voragen |
| Bioaerosol mass spectrometry for rapid detection of individual airborne mycobacterium tuberculosis H37Ra particles. | Biological sciences | Herbert Tobias, Matthais Frank, Millie P. Schafer, Eric E. Gard, Maurice Pitesky, David P. Fergenson, Joanne Horn |
| Biocatalytic conversion of avermectin to 4"-oxo-avermectin characterization of biocatalytically active bacterial strains and of cytochrome P450 monooxygenase enzymes and their genes. | Biological sciences | Volker Jungmann, Istvan Molnar, J. Paul Pachlatko, Philip E. Hammer, James M. Ligon, D. Steven Hill, Dagmar Buckel, Ross Zirkle, Thomas G. Buckel |
| Biocatalytic conversion of avermectin to 4"-oxo-avermectin: Heterologous expression of emal cytochrome P450 monooxygenase. | Biological sciences | Volker Jungmann, Istvan Molnar, Philip E. Hammer, James M. Ligon, D. Steven Hill, Ross Zirkle, Thomas G. Buckel, Johannes Paul Pachlatko, Frank Gross |
| Biocatalytic production of perillyl alcohol from limonene by using a novel Mycobacterium sp. cytochrome P450 alkane hydroxylase expressed in Pseudomonas putida. | Biological sciences | Bernard Witholt, Wouter A. Duetz, Jan B. van Beilen, Rene Holtackers, Daniel Luscher, Ulrich Bauer |
| Biocidal activity of formaldehyde and nonformaldehyde biocides toward Mycobacterium immunogenum and Pseudomonas fluorescens in pure and mixed suspensions in synthetic metalworking fluid and saline. | Biological sciences | Suresh B. Selvaraju, Izhar U.H. Khan, Jagjit S. Yadav |
| Biodegradation of natural rubber and related compounds: Recent insights into a hardly understood catabolic capability of microorganisms. | Biological sciences | Alexander Steinbuchel, Karsten Rose |
| Biodesulfurization of dibenzothiophene by microbial cells coated with magnetite nanoparticles. | Biological sciences | GuoBin Shan, JianMin Xing, HuaiYing Zhang, HuiZhou Liu |
| Biofilm formation by Escherichia cole O157:H7 on stainless steel: Effect of exopolysaccharide and curli production on its resistance to chlorine. | Biological sciences | Larry R. Beuchat, Jee-Hoon Ryu |
| Biological control of hog waste odor through stimulated microbial Fe(III) reduction. | Biological sciences | Michael J. McInerney, John D. Coates, Laurie A. Achenbach, Kimberly A. Cole, Urania Michaelidou, Jennifer Patrick |
| Biomakers for in situ detection of anaerobic ammonium-oxidizing (anammox) bacteria. | Biological sciences | Michael Wagner, Jaap S. Sinninghe Damste, Markus C. Schmid, Ingo Schmidt, Mike S.M. Jetten, Niels Peter Revsbech, Marc Strous, Ana Dapena, Boran Kartal, Ramon Mendez, J. Gijis Kuenen, Bart Maas, Irina Cirpus, Katinka van de Psa-Schoonen, Marcel Kuypers, Laura van Niftrik, Jack van de Vossenberg |
| Biomass production and assimilation of dissolved organic matter by SAR11 bacteria in the Northwest Atlantic Ocean. | Biological sciences | Matthew T. Cottrell, Rex R. Malmstrom, Hila Elifantz, David L. Kirchmann |
| Biosensor detection of botulinum toxoid A and staphylococcal enterotoxin B in food. | Biological sciences | Kim E. Sapsford, Chris R. Taitt, Nicole Loo, Frances S. Logler |
| Biosynthesis of auxin by the gram-positive phytopathogen Rhodococcus fascians is controlled by compounds specific to infected plant tissues. | Biological sciences | Olivier Vandeputte, Sevgi Oden, Adeline Mol, Danny Vereecke, Koen Goethals, Els Prinsen, Mondher El Jaziri |
| Biosynthesis of Natural flavanones in Saccharomyces cerevisiae. | Biological sciences | Yajun Yan, Abhijeet Kohli, Mattheos A.G. Koffas |
| Biotinylation facilitates the uptake of large peptides by Escherichia coli and other gram-negative bacteria. | Biological sciences | Jennifer R. Walker, Elliot Altman |
| Biphasic behavior of anammox regulated by nitrite and nitrate in an estuarine sediment. | Biological sciences | Mark Trimmer, Joanna C. Nicholls, Christian A. Davies, Nicholas Morley, John Aldridge |
| Bleeding sap and old wood are the two main sources of contamination of merging organs of vine plants by Xylophilus ampelinus, the causal agent of bacterial necrosis. | Biological sciences | S. Grall, C. Roulland, J. Guillaumes, C. Manceau |
| Byssochlamys nivea as a source of mycophenolic acid. | Biological sciences | Isabelle P. Oswald, Olivier Puel, Souria Tadrist, Marcel Delagorge, Pierre Galtier |
| Cadmium accumulation and DNA homology with metal resistance genes in sulfate-reducing bacteria. | Biological sciences | Nuzhat Ahmed, Geoffrey M. Gadd, Naghma Naz, Hilary K. Young |
| Can 15-locus mycobacterial interspersed repetitive unit-variable-number tandem repeat analysis provide insight into the evolution of Mycobacterium tuberculosis? | Biological sciences | Lucy Baker, Francis Drobniewski, Andrea Gibson, Timothy Brown |
| Capsular polysaccaride surrounds smooth and rugose types of Salmonella enterica serovar Typhimurium DT104. | Biological sciences | S.W. Joseph, C. Eriksson de Rezende, Y. Anriany, L.E. Carr, R.M. Weiner |
| Captured diversity in a culture collection: Case study of the geographic and habitat distributions of environmental isolates held at the American type culture collection. | Biological sciences | David Emerson, Melissa Merrill Floyd, Jane Tang, Matthew Kane |
| Catalyzed reported deposition-fluorescence in situ hybridization protocol to evaluate phagotrophy in mixotrophic protists. | Biological sciences | Emilio O. Casamayor, Juan M. Medina-Sanchez, Marisol Felip |
| Cell adsorption and selective desorption for separation of microbial cells by using chitosan-immobilized silica. | Biological sciences | Munehiro Kubota, Masayoshi Matsui, Hiroyuki Chiku, Nobuyuki Kasashima, Manabu Shimojoh, Kengo Sakaguchi |
| Cell-cell influences on bacterial community development in aquatic biofilms. | Biological sciences | Michael R.J. Forstner, Clay Fuqua, Mary B. Barnes, M.. Katy Windham, Mubina Merchant |
| Cell surface display of lipase in Pseudomonas putida KT2442 using OprF as an anchoring motif and its biocatalytic applications. | Biological sciences | Sang Yup Lee, Seung Hwan Lee, Byoung Chul Park |
| Changes in antimicrobial susceptibility of native Enterococcus faecium in chickens fed virginiamycin. | Biological sciences | Patrick F. McDermott, David D. Wagner, Mary Bartholomew, Patti Cullen, Sussanah K. Hubert, Shawn D. McDermott, Shabbir Simjee |
| Changes in nitrogen-fixing and ammonia-oxidizing bacterial communities in soil of a mixed conifer forest after wildfire. | Biological sciences | Cheryl R. Kuske, Chris M. Yeager, Diana E. Northup, Christy C. Grow, Susan M. Barns |
| Chaperone-mediated folding and maturation of the Penicillin acylase precursor in the cytoplasm of Escherichia coli. | Biological sciences | Yali Xu, Jeno M. Scharer, Chiao-Ling Weng, Murray Moo-Young, C. Perry Chou, Niju Narayanan, Ming-Yi Hsieh, William A. Anderson |
| Characteristics and living patterns of marine myxobacterial isolates. | Biological sciences | Bing Wang, Yong Zhang, Yu-qing ZAhang, Yue-zhong Li, Zhi-hong Wu, Cui-ying Zhang, Zhi-jun Qiu, Xun Gong |
| Characterization and functional analysis of the MAL and MPH loci for maltose utilization in some ale and lager yeast strains. | Biological sciences | John Londesborough, Laura Ruohonen, Virve Vidgren |
| Characterization of a Corynebacterium glutamicum lactate utilization operon induced during temperature-triggered glutamate production. | Biological sciences | Lothar Eggeling, Jean-Louis Goergen, Stephane Delaunay, Corinna Stansen, Volker F. Wendisch, Davin Uy |
| Characterization of a forest soil metagenome clone that confers indirubin and indigo production on Escherichia coli. | Biological sciences | Jin-Cheol Kim, He Kyoung Lim, Eu Jin Chung, Gyung Ja Choi, Kyoung Soo Jang, Young Ryun Chung, Kwang Yun Cho, Seon-Woo Lee |
| Characterization of a mobile clpL gene from Lactobacillus rhamnosus. | Biological sciences | Kirsi Savijoki, Airi Palva, Pekka Varmanen, Aki Suokko, Erja Malinen |
| Characterization of a multicopper oxidase gene from Staphylococcus aureus. | Biological sciences | S. Sitthiask, K. Howieson, C. Amezola, R.K. Jayaswal |
| Characterization of an inducible phenylserine aldolase from Pseudomonas putida 24-1. | Biological sciences | Hiroshi Maeda, Haruo Misono, Kouiti Tuda, Sakuko Ueshima, Naoto Miyazaki, Shinji Nagata |
| Characterization of a nucleus-encoded chitinase from the yeast Kluyveromyces lactis. | Biological sciences | Paul A. Colussi, Christopher H. Taron, Charles A. Specht |
| Characterization of an unusual cold-active beta-glucosidase belonging to family 3 of the glycoside hydrolases from the psychrophilic isolate paenibacillus sp. strain C7. | Biological sciences | Jean E. Brenchley, Stephanie Shipkowski |
| Characterization of a resistance-nodulation-cell division transporter system associated with the syr-syp genomic island of Pseudomonas syringae pv. syringae. | Biological sciences | Hyojeung Kang, Dennis C. Gross |
| Characterization of a thermoacidophilic L-arabinose isomerase from Alicyclobacillus acidocaldarius: Role of Lys-269 in pH optimum. | Biological sciences | Yu-Ryang Pyun, Sang-Jae Lee, Dong-Woo Lee, Eun-Ah Choe, Young-Ho Hong, Seong-Bo Kim, Byoung-Chan Kim |
| Characterization of a unique chromosomal copper resistance gene cluster from Xanthomonas campestris pv. vesicatoria. | Biological sciences | Jeffrey B. Jones, Huseyin Basim, Gerald V. Minsavage, Robert E. Stall, Jaw-Fen Wang, Savita Shanker |
| Characterization of botulinum progenitor toxins by mass spectrometry. | Biological sciences | Harry B. Hines, Frank Lebeda, Martha Hale, Ernst E. Brueggemann |
| Characterization of carbohydrate-binding cytochrome b562 from the white-rot fungus Phanerochaete chrysosporium. | Biological sciences | Satoshi Kaneko, Makoto Yoshida, Kiyohiko Igarashi, Masahisa Wada, Norio Suzuki, Hirotoshi Matsumura, Nobuhumi Nakamura, Masahiro Samejima |
| Characterization of colony morphology variants isolated from Pseudomonas aeruginosa biofilms. | Biological sciences | Matthew R. Parsek, Mary Jo Kirisits, Lynne Prost, Melissa Starkey |
| Characterization of Cry34/Cry35 binary insecticidal proteins from diverse Bacillus thuringiensis strain collections. | Biological sciences | H. Ernest Schnepf, Stacey Lee, Jeff D. Wolt, JoAnna Dojillo, Kenneth E. Narva, Kristin Fencil, Lisa Morera, Paula Burmeister, Linda Nygaard |
| Characterization of enzymatic antiooxidants in the lichen Ramalina lacera and their response to rehydration. | Biological sciences | Lior Weissman, Jacob Garty, Ayala Hochman |
| Characterization of highly efficient sucrose isomerase from Pantoea dispersa UQ68J and cloning of the sucrose isomerase gene. | Biological sciences | Robert G. Birch, Luguang Wu |
| Characterization of hydrogenase and reductive dehalogenase activities of Dehalococcoides ethenogenes strain 195. | Biological sciences | Ivonne Nijenhuis, Stephen H. Zinder |
| Characterization of ichthyocidal activity of Pfiesteria piscicida: Dependence on the dinospore cell density. | Biological sciences | Tomas Drgon, Keiko Saito, Patrick M. Gillevet, Masoumeh Sikaroodi, Brent Whitaker, Danara N. Krupatkina, Federico Argemi, Gerardo R. Vasta |
| Characterization of microbial communities found in the human vagina by analysis of terminal restriction fragment length polymorphisms of 16S rRNA genes. | Biological sciences | Larry J. Forney, Marco J.L. Coolen, Eduard Post, Catherine C. Davis |
| Characterization of microbial communities removing nitrogen oxides from flue gas: The BioDeNOx process. | Biological sciences | Gerard Muyzer, J. Gijs Kuenen, Rajkumari Kumaraswamy, Udo van Dongen, Wiebe Abma, Mark C.M. van Loosdrecht |
| Characterization of microbial community structure in Gulf of Mexico gas hydrates. | Biological sciences | Patricia A. Sobecky, Heath J. Mills, Robert J. Martinez, Sandra Story |
| Characterization of the cro-ori region of the Streptococcus thermophilus virulent bacteriophage DT1. | Biological sciences | Christian Vadeboncoeur, Michel Frenette, Sylvain Moineau, Armelle Cochu, Denise Tremblay, Gnevieve Lamothe, Celine Levesque, Frederic Bissonnette, Martin Duplessis |
| Characterization of the export of bulk poly(A)(super +) mRNA in Saccharomyces cerevisiae during the wine-making process. | Biological sciences | Shingo Izawa, Reiko Takemura, Takeo Miki, Yoshiharu Inoue |
| Characterization of Wolbachia transfection efficiency by using microinjection of embryonic cytoplasm and embryo homogenate. | Biological sciences | Zhiyong Xi, Stephen L. Dobson |
| Chembiosynthesis of novel 6-deoxyerythronolide B analogues by mutation of the loading module of 6-deoxyerythronolide B synthase 1. | Biological sciences | Zhihao Hu, Sumati Murli, Gary W. Ashley, Karen S. MacMillan, Steven D. Dong, James T. Kealey, Christopher D. Reeves, Jonathan Kennedy |
| Chemical forms of selenium in the metal-resistant bacterium Ralstonia metallidurans CH34 exposed to selenite and selenate. | Biological sciences | Geraldine Sarret, Jacques Coves, Laure Avoscan, Marie Carriere, Barbara Gouget, Richard Collins, Nicolas Geoffroy, Francine Carrot |
| Chitinase genes in lake sediments of Ardley Island, Antarctica. | Biological sciences | Peng Wang, Fengping Wang, Xiang Xiao, Xuebin Yin, Jian Lin, Liguang Sun, Ziyong You |
| Chlorine inactivation of bacterial bioterrorism agents. | Biological sciences | Matthew J. Arduino, Ricardo Murga, Rodney M. Donlan, Eugene W. Rice, Laura J. Rose, Bette Jensen, Alicia Peterson |
| Chloroethene biodegradation in sediments at 4 degree Celsius. | Biological sciences | P.M. Bradley, F.H. Chapelle, S. Richmond |
| Class 1 integrons and tetracycline resistance genes in Alcaligenes, Arthrobacter, and Pseudomonas spp. isolated from pigsties and manured soil. | Biological sciences | Yvonne Agerso, Dorthe Sandvang |
| Clinical and environment isolates of Legionella pneumophila serogroup 1 cannot be distinguished by sequence analysis of two surface protein genes and three housekeeping genes. | Biological sciences | Francois Vandenesch, Gerard Lina, Jerome Etienne, Helena Aurell, Pierre Farge, Sophie Jarraud, Helene Meugnier, Manolo Gouy, Francoise Forey |
| Clonal expansion may account for high levels of quinolone resistance in Salmonella enterica serovar enteritidis. | Biological sciences | C. O'Hare, M. Cormican, D. Morris, Donna Kilmartin, G. Corbett-Feeney |
| Cloning and characterization of the glucosidase II alpha subunit gene of Trichoderma reesei: A frameshift mutation results in the aberrant glycosylation profile of the hypercellulolytic strain rut-C30. | Biological sciences | Jaana Uusitalo, Merja Penttila, Steven Geysens, Roland Contreras, Tiina Pakula, Isabelle Dewerte |
| Cloning and characterization of two xyloglucanases from Paenibacillus sp. strain KM21. | Biological sciences | Katsuro Yaoi, Tomonori Nakai, Yoshiro Kameda, Ayako Hiyoshi, Yasushi Mitsuishi |
| Cloning, biochemical properties, and distribution of mycobacterial haloalkane dehalogenases. | Biological sciences | Andrea Jesenska, Jiri Damborsky, Ivo Pavlik, Ivan Rychlik, Yuji Nagata, Zbynek Prokop, Marta Monincova, Milan Bartos, Petra Mobius, Martina Pavlova, Michal Strouhal, Radka Chaloupkova, Iva Tesinska |
| Cloning, expression, and site-directed mutagenesis of the propane monooxygenase genes from Mycobacterium sp. strain M156. | Biological sciences | Chan K. Chan Kwo Chion, Sarah E. Askew, David J. Leak |
| Cloning of Beauveria bassiana chitinase gene Bbchit1 and its application to improve fungal strain virulence. | Biological sciences | Fang Weiguo, Bo Leng, Yuehua Xiao, Kai Jin, Jincheng Ma, Yanhua Fan, Jing Feng, Xingyong Yang, Yongjun Zhang, Yan Pei |
| Cloning, sequencing, and expression of a Eubacterium cellulosolvens 5 gene encoding and endoglucanase (Cel5A) with novel carbohydrate-binding modules, and properties of Cel5A. | Biological sciences | Kazutoyo Yoda, Atsushi Toyoda, Yoshihiro Mukoyama, Yutaka Nakamura, Hajime Minato |
| Clustering of Mycobacterium avium subsp. paratuberculosis in rabbits and the environment: How hot is a hot spot? | Biological sciences | Ilias Kyriazakis, Johanna Judge, Alastair Greig, David J. Allcroft, Michael R. hutchings |
| Coaggregation facilitates interspecies hydrogen transfer between Pelotomaculum thermopropionicum and Methanothermobacter thermautotrophicus. | Biological sciences | Kazuya Watanabe, Katsutoshi Hori, Shun'ichi Ishii, Tomoyuki Kosaka, Yasuaki Hotta |
| Coexistence of bacterial sulfide oxidizers, sulfate reducers, and spirochetes in a gutless worm (oligochaeta) from the Peru margin. | Biological sciences | Rudolf Amann, Nicole Dubilier, Anna Blazejak, Christer Erseus |
| Cofactor dependence in furan reduction by Saccharomyces cerevisiae in fermentation of acid-hydrolyzed lignocellulose. | Biological sciences | Barbel Hahn-Hagerdal, Gunnar Liden, Anneli Nilsson, Marie F. Gorwa-Grauslund |
| Colonization of cattle intestines by Campylobacter jejuni and Campylobacter laniena. | Biological sciences | G. Douglas Inglis, Lisa D. Kalischuk, Hilma W. Busz, John P. Kastelic |
| Colonization of mucin by human intestinal bacteria and establishment of biofilm communities in a two-stage continuous culture system. | Biological sciences | George T. Macfarlane, Sandra Macfarlane, Emma J. Woodmansey |
| Combined antimicrobial resistance in Enterococcus faecium isolated from chickens. | Biological sciences | Roland Leclercq, Odile Petsaris, Fabien Miszczak, Mireille Gicquel-Bruneau, Anges Perrin-Guyomard, Florence Humbert, Pascal Sanders |
| Combined approach for characterization of uncultivated magnetotactic bacteria from various aquatic environments. | Biological sciences | Dirk Schuler, Jorg Peplies, Christine B. Flies |
| Cometabolism of trihalomethanes by Nitrosomonas europaea. | Biological sciences | Gerald E. Speitel Jr., Lynn E. Katz, David G. Wahman |
| Common, but complex, mode of resistance of Plutella xylostella to Bacillus thuringiensis toxins Cry1Ab and Cry1Ac. | Biological sciences | Ali H. Sayyed, Denis J. Wright, Baltasar Escriche, Neil Crickmore, Roxani Gatsi, M. Sales Ibiza-Palacios |
| Common receptor for Bacillus thuringiensis toxins Cry1Ac, Cry1Fa, and Cry1Ja in Helicoverpa armigera, Helicoverpa zea, and Spodoptera exigua. | Biological sciences | Juan Ferre, carmen Sara Hernandez |
| Community analysis of a mercury hot spring supports occurrence of domain-specific forms of mercuric reductase. | Biological sciences | Paul Blum, Jessica Simbahan, Elizabeth Kurth, James Schelert, Amanda Dillman, Etsuko Moriyama, Stevan Jovanovich |
| Community composition of a hypersaline endoevaporitic microbial mat. | Biological sciences | Donald E. Canfield, Aharon Oren, Ketil Bernt Sorensen, Andreas P. Teske |
| Community structure and diversity of biofilms from a beer bottling plant as revealed using 16S rRNA gene clone libraries. | Biological sciences | Andre Lipski, Karlheinz Altendorf, Markus Timke, Ngoc Quynh Wang-Lieu |
| Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques. | Biological sciences | Kazunori Nakamura, Yuji Sekiguchi, Yoichi Kamagata, Satoshi Hanada, Hideyuki Tamaki, Nakao Nomura, Masatoshi Matsumura |
| Comparative inactivation of adenovirus serotypes by UV light disinfection. | Biological sciences | Charles P. Gerba, Nena Nwachuku, Amy Oswald, Faezeh D. Mashadi |
| Comparison between cultured small-intestinal and fecal microbiotas in beagle dogs. | Biological sciences | Pentti Huovinen, Silja Mentula, Jaana Harmoinen, Matti Heikkila, Elias Westermarck, Merja Rautio, Eija Kononen |
| Comparison of Bacteroides-Prevotella 16S rRNA genetic makers for fecal samples from different animal species. | Biological sciences | Lisa R. Fogarty, Mary A. Voytek |
| Comparison of diversities of Escherichia coli O157 shed from a cohort of spring-born beef calves at pasture and in housing. | Biological sciences | Leila Vali, Michael C. Pearce, Karen A. Wisely, Hazel I. Knight, Alastair W. Smith, Ahmed Hamouda, Sebastian G.B. Amyes |
| Comparison of genome sequences of single-stranded RNA viruses infecting the bivalve-killing dinoflagellate Heterocapsa circularisquama. | Biological sciences | Keizo Nagasaki, Yuji Tomaru, Yoko Shirai, Kensho Nishida, Yoshitake Takao, Hiroyuki Mizumoto |
| Comparison of ileum microflora of pigs fed corn-, wheat-, or barley-based diets by chaperonin-60 sequencing and quantitative PCR. | Biological sciences | Janet E. Hill, Sean M. Hemmingsen, Blair G. Goldade, Tim J. Dumonceaux, Jonathan Klassen, Ruurd T. Zijlstra, Swee Han Goh, Andrew G. Van Kessel |
| Comparison of microbial community compositions of two subglacial environments reveals a possible role for microbes in chemical weathering processes. | Biological sciences | Brian D. Lanoil, Martin Sharp, Julia Foght, Mark Skidmore, Suzanne P. Anderson |
| Comparison of minisatellite polymorphisms in the Bacillus cereus complex: A simple assay for large-scale screening and identification of strains most closely related to Bacillus anthracis. | Biological sciences | Francoise Ramisse, Eric Hernandez, Samina Valjevac, Valerie Hilaire, Olivier Lisanti, Gilles Vergnaud, Christine Pourcel, Jean-Didier Cavallo |
| Comparison of rectoanal mucosal swab cultures and fecal cultures for determining prevalence of Escherichia coli O157:H7 in feedlot cattle. | Biological sciences | T.G. Nagaraja, J.M. Sargeant, K.F. Lechtenberg, M.A. Greenquist, J.S. Drouillard, B.E. Depenbusch, Xiaorong Shi |
| Comparison of the levels of heat resistance of wild-type cpe knockout, and cpe plasmid-cured Clostridium perfringens type A strains. | Biological sciences | Mahfuzur R. Sarker, Deepa Raju |
| Compatible solutes of the hyperthermophile Palaeococcus ferrophilus: Osmoadaptation and thermoadaptation in the order Thermococcales. | Biological sciences | Helena Santos, Clelia Neves, Milton S. De Costa |
| Competitive interactions in mixed-species biofilms containing the marine bacterium Pseudoalteromonas tunicata. | Biological sciences | Staffan Kjelleberg, Jeremy S. Webb, Dhana Rao |
| Complete genome sequence of phisHSIC, a pseudotemperate marine phage of listonella pelagia. | Biological sciences | Matthew Androlewicz, John H. Paul, Shannon J. Williamson, Amy Long, R. Nathan Authement, David John, Anca M. Segall, Forest L. Rohwer, Stacey Patterson |
| Complete sequences of four plasmids of Lactococcus lactis subsp. cremoris SK11 reveal extensive adaptation to the dairy environment. | Biological sciences | Roland J. Siezen, Michiel Kleerebezem, Richard van Kranenburg, Willem M. de Vos, Bernadet Renckens, Iris van Swam, Sander Peters |
| Complexation of uranium by cells and S-layer sheets of Bacillus shaericus JG-A12. | Biological sciences | Mohemed L. Merroun, Johannes Raff, Andre Rossberg, Christoph Henning, Tobias Reich, Sonja Selenska-Pobell |
| Complexity of bacterial communities in a river-floodplain system (Danube, Austria). | Biological sciences | Gerhard J. Herndl, Jesus M. Arrieta, Peter Peduzzi, Katharina Besemer, Markus M. Moesneder |
| Composition and distribution of extracellular polymeric substances in aerobic flocs and granular sludge. | Biological sciences | B.S. McSwain, R.L. Irvine, M. Hausner, Wilderer P.A. |
| Composition and structure of microbial communities from stromatolites of Hamelin Pool in Shark Bay, Western Australia. | Biological sciences | Norman R. Pace, Jeffrey J. Walker, Dominic Papineau, Stephen J. Mojzsis |
| Concentrations of pathogens and indicators in animal feces in the Sydney watershed. | Biological sciences | Daniel Deere, Peter Cox, Merran Griffith, Mark Angles, Christobel Ferguson |
| Concurrent quantitation of total Campylobacter and total ciprofloxacin-resistant Campylobacter loads in rinses from retail raw chicken carcasses from 2001 to 2003 by direct plating at 42 degree C.. | Biological sciences | Michael G. Johnson, Ramakrishna Nannapaneni, Robert Story, Keith C. Wiggins |
| Conjugal TOL transfer from Pseudomonas putin to Pseudomonas aeruginosa: Effects of restriction proficiency, toxicant exposure, cell density ratios, and conjugation detection method on observed transfer efficiencies. | Biological sciences | Barth F. Smets, Catalina Arango Pinedo |
| Construction, analysis, and beta-glucanase screening of a bacterial artificial chromosome library from the large-bowel microbiota of mice. | Biological sciences | Jens Walter, Gerald W. Tannock, Marco Mangold |
| Construction of a cloning system for the mass production of a virus-binding protein specific for poliovirus type 1. | Biological sciences | Daisuke Sano, Tatsuo Omura |
| Construction of a Co1D cda promoter-based SOS-green fluorescent protein whole-cell biosensor with higher sensitivity toward genotoxic compounds than constructs based on recA, umuDC, or sulA promoters. | Biological sciences | Lars Hestbjerg Hansen, Soren J. Sorensen, Anders Norman |
| Construction of an alpha toxin gene knockout mutant of Clostridium perfringens type A by use of a mobile group II intron. | Biological sciences | Julian I. Rood, Phalguni Gupta, Bruce A. McClane, Yue Chen, Derek J. Fisher |
| Construction of engineered bifunctional enzymes and their overproduction in Aspergillus niger for improved enzymatic tools to degrade agricultural by-products. | Biological sciences | Peter J. Punt, Eric Record, Marcel Asther, Anthony Levasseur, David Navarro, Jean-Pierre Belaich |
| Construction of in-frame aroA deletion mutants of Mannheimi haemolytica, Pasteurella multocida, and Haemophilus somnus by using a new temperature-sensitive plasmid. | Biological sciences | Robert E. Briggs, Fred M. Tatum |
| Contingency locus in ctsR of Listeria monocytogenes Scott A: A strategy for occurrence of abundant piezotolerant isolates within clonal populations. | Biological sciences | Marjon H.J. Wells-Bennik, Kimon A.G. Karatzas, Vasileios P. Valdramidis |
| Continuous-flow capillary assay for measuring bacterial chemotaxis. | Biological sciences | Michael D. Aitken, Aaron M.J. Law |
| Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean. | Biological sciences | Jakob Pernthaler, Gerhard J. Herndl, Annelie Pernthaler, Eva Teira, Thomas Reinthaler, Hendrik van Aken, Cornelius Veth |
| Contribution of folate biosynthesis to Ralstonia solanacearum proliferation in intercellular spaces. | Biological sciences | Kouhei Ohnishi, Akinori Kiba, Yasufumi Hikichi, Rena Shinohara, Ayami Kanda |
| Cooccurrence of aerobic and anaerobic methane oxidation in the water column of Lake PluBsee. | Biological sciences | Gundula Eller, Martin Kruger, Layla Kanel |
| Cooccurrence of ScDSP gene expression, cell death, and DNA fragmentation in a marine diatom, Skeletonema costatum. | Biological sciences | Chih-Ching Chung, Sheng-Ping L. Hwang, Jeng Chang |
| Cooperative effect of two surface amino acid mutations (Q252L and E170K) in glucose dehydrogenase from Bacillus megaterium IWG3 on stabilization of its oligometric state. | Biological sciences | Shigeaki Harayama, Sang-Ho Baik, Fabrice Michel, Nushin Aghajari, Richard Haser |
| Copper-adapted Suillus luteus, a symbiotic solution for pines colonizing Cu mine spoils. | Biological sciences | K. Adriaensen, T. Vralstad, J.-P. Noben, J. Vangronsveld, J.V. Colpaert |
| CorA affects tolerance of Escherichia coli and Salmonella enterica serovar typhimurium to the lactoperoxidase enzyme system but not to other forms of oxidative stress. | Biological sciences | Chris W. Michiels, Philipp De Spiegeleer, Jan Sermon, Abram Aertsen, Kristof Vanoirbeek, Eva M.-R.P. Wevers, Leentje Jansen |
| Correlation between anammox activity and microscale distribution of nitrite in subtropical mangrove sediment. | Biological sciences | Nils Risgaard-Petersen, Rikke Louise Meyer, Diane Elizabeth Allen |
| Correlation of biological activity and reactor performance in biofiltration of toluene with the fungus Paecilomyces variotii CBS115145. | Biological sciences | Ines Garcia-Pena, Sergio Hernandez, Richard Auria, Sergio Revah |
| Correlation of Campylobacter bacteriophage with reduced presence of hosts in broiler chicken ceca. | Biological sciences | I.F. Connerton, P.L. Connerton, R.J. Atterbury, C.l Swift, J.A. Frost, C.E.R. Dodd, C.E.D. Rees |
| Correlation of phenotype with the genotype of egg-contaminating Salmonella enterica serovar enteritidis. | Biological sciences | Hailu Kinde, Steffen Porwollik, Michael McClelland, Jean Guard-Bouldin, Cesar A. Morales, Jonathan G. Frye |
| Cost-effective application of pulsed-field gel electrophoresis to typing of Salmonella enterica serovar Typhimurium. | Biological sciences | Geraldine Doran, Dearbhaile Morris, Colette O'Hare, Niall DeLappe, Bernard Bradshaw, Geraldine Corbett-Feeney, Martin Cormican |
| Creating new genes by plasmid recombination in Escherichia coli and Bacillus subtilis. | Biological sciences | Miroslav Radman, Ivan Matic, Ana Gomez, Tatjana Galic, Jean-Francois Mariet, Marie-Agnes Petit |
| Critical factors influencing the occurrence of Vibrio cholerae in the environment of Bangladesh. | Biological sciences | Anwar Huq, Rita R. Colwell, G. Balakrish Nair, J. Glenn Morris Jr., R. Bradley Sack, David A. Sack, Azhar Nizam, Ira M. Longini, Afsar Ali, M.N. Huda Khan, A. Kasem Siddique, Mohammed Yunus, M. John Albert |
| Crucial role of extracellular polysaccharides in desiccation and freezing tolerance in the terrestrial cyanobacterium Nostoc Commune. | Biological sciences | Yoshiyuki Tamaru, Yayoi Takani, Takayuki Yoshida, Toshio Sakamoto |
| Cultivation of mesophilic soil crenarchaeotes in enrichment cultures from plant roots. | Biological sciences | Robert M. Goodman, Holly M. Simon, David K. Willis, Paul J. Weimer, Marek K. Sliwinski, Courtney E. Jahn, Luke T. Bergerud |
| Cultivation system using glass beads immersed in liquid medium facilitates studies of Streptomyces differentiation. | Biological sciences | Liem D. Nguyen, Ladislava Kalachova, Jana Novotna, Martin Holub, Olga Kofronova, Oldrich Benada, Charles J. Thompson, Jaroslav Weiser |
| Culturability and coexistence of colony-forming and single-cell marine bacterioplankton. | Biological sciences | Ake Hagstrom, Karin Simu, Karin Holmfeldt, Ulla Li Zweifel |
| Culture-dependent and culture-independent diversity within the obligate marine actinomycete genus Salinispora. | Biological sciences | William Fenical, Tracy J. Mincer, Paul R. Jensen |
| Culture-dependent and -independent methods to investigate the microbial ecology of Italian fermented sausages. | Biological sciences | Luca Cocolin, Carlo Cantoni, Giuseppe Comi, Kalliopi Rantsiou, Lucilla Iacumin, Rosalinda Urso, Patrizia Cattaneo |
| Culture-independent characterization of the microbiota of the ant lion Myrmeleon mobilis (Neuroptera: Myrmeleontidae). | Biological sciences | Eric V. Stabb, Anne K. Dunn |
| Culture-independent techniques for rapid detection of bacteria associated with loss of chloramine residual in a drinking water system. | Biological sciences | Christopher P. Saint, Paul T. Monis, Daniel Hoefel, Warwick L. Grooby, Stuart Andrews |
| Cumulative effect of amino acid replacements results in enhanced thermostability of potato type L alpha-glucan phosphorylase. | Biological sciences | Takashi Kuriki, Hiroki Takata, Takeshi Takaha, Michiyoa Yanase , Kazutoshi Fujii |
| Cutinase-like enzyme from the yeast Cryptococcus sp. strain S-2 hydrolyzes polylactic acid and other biodegradable plastics. | Biological sciences | Kazuo Masaki, Numbi Ramudu Kamini, Hiroko Ikeda, Haruyuki Iefuji |
| Cyt1A of Bacillus thuringiensis delays evolution of resistance to Cry11A in the mosquito Culex quinquefasciatus. | Biological sciences | Margaret C. Wirth, Brian A. Federici, William E. Walton, Hyun-Woo Park |
| Cytotoxicity potential and genotypic characterization of Escherichia coli isolates from environmental and food sources. | Biological sciences | Cindy H. Nakatsu, Arun K. Bhunia, Yadilka Maldonado, Jennifer C. Fiser |
| Degradation of 1,4-dioxane and cyclic esters by an isolated fungus. | Biological sciences | Kunichika Nakamiya, Syunji Hashimoto, Hiroyasu Ito, John S. Edmonds, Masatoshi Morita |
| Degradation of azo dyes by laccase and ultrasound treatment. | Biological sciences | Michael M. Tauber, Georg M. Guebitz, Astrid Rehorek |
| Degradation of azo dyes by Trametes villosa laccase over long periods of oxidative conditions. | Biological sciences | Astrid Rehorek, Andrea Zille, Barbara Gornacka, Arthur Cavaco-Paulo |
| Degradation of beta-hexachlorocyclohexane by haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26. | Biological sciences | Jiri Damborsky, Yuji Nagata, Zbynek Prokop, Masataka Tsuda, Yoshiyuki Ohtsubo, Yukari Sato, Petr Jerabek, Ashwani Kumar |
| Degradation of wheat straw by Fibrobacter succinogenes S85: A liquid- and solid-state nuclear magnetic resonance study. | Biological sciences | M. Matulova, R. Nouaille, P. Capek, E. Forano, M. Pean, A.-M. Delort |
| Dependence of arbuscular-mycorrhizal fungi on their plant host for palmitic acid synthesis. | Biological sciences | Tyler J. Avis, Martin Trepanier, Guillaume Becard, Claude Willemot, Peter Moutoglis, Serge Gagne, Jacques-Andre Rioux |
| Design and evaluation of the 16S rRNA-targeted peptide nucleic acid probes for whole for whole-cell detection of members of the genus Listeria. | Biological sciences | Eric A. Johnson, Jens J. Hyldig-Nielsen, Byron F. Brehm-Stecher |
| Design, validation, and application of a seven-strain Staphylococcus aureus PCR product microarray for comparative genomics. | Biological sciences | Philip D. Butcher, Jodi A. Lindsay, Gemma L. Marsden, Jason Hinds, Adam A. Witney, Matthew T. G. Holden, Richard A. Stabler, Sarah E. Husain, J. Keith Vass |
| Desulfitobacterium hafniense is present in a high proportion within the biofilms of a high-performance pentachlorophenol-degrading, methanogenic fixed-film reactor. | Biological sciences | M. Lanthier, P. Juteau, Lepine F., R. Beaudet, R. Villemur |
| Desulfotomaculum and methanobacterium spp. dominate a 4- to 5-kilometer-deep fault. | Biological sciences | Barbara Sherwood Lollar, David L. Balkwill, James K. Fredrickson, Fred J. Brockman, Duane P. Moser, Brett J. Baker, Thomas M. Gihring, Michael E. Dollhopf, Lisa M. Pratt, Erik Boice, Gordon Southam, Greg Wanger, Susan M. Pfiffner, Li-Hung Lin, T.C. Onstott |
| Detection and characterization of streptococcus thermophilus bacteriophages by use of the antireceptor gene sequence. | Biological sciences | Miguel A. Alvarez, Ana G. Binetti, Beatriz Del Rio, Cruz M. Martin |
| Detection and cultivation of soil Verrucomicrobia. | Biological sciences | Peter H. Janssen, Parveen Sangwan, Kathryn E.R. Davis, Suzana Kovac, Michelle Sait |
| Detection and discrimination of Cryptosporidium parvum and C. hominis in water samples by immunomagnetic separation-PCR. | Biological sciences | Yoshitsugu Ochiai, Chieko Takada, Mitsugu Hosaka |
| Detection and isolation of ultrasmall microorganisms from a 120,000-year-old Greenland glacier ice core. | Biological sciences | Jean E. Brenchley, Vanya I. Miteva |
| Detection, characterization, and in vitro and in vivo expression of genes encoding S-proteins in Lactobacillus gallinarum strains isolated from chicken crops. | Biological sciences | Gwen E. Allison, Gerald W. Tannock, Le Luo Guan, Doug R. Korver, Karen E. Hagen |
| Detection of airborne Stachybotrys chartarum macrocyclic trichothecene mycotoxins in the indoor environment. | Biological sciences | T.L. Brasel, J.M. Martin, C.G. Carriker, S.C. Wilson, D.C. Straus |
| Detection of airborne Stachybotrys chartarum macrocyclic trichothecene mycotoxins on particulates smaller than conidia. | Biological sciences | T.L. Brasel, S.C. Wilson, D.C. Straus, D.R. Douglas |
| Detection of carp interstitial nephritis and gill necrosis virus in fish droppings. | Biological sciences | Moshe Kotler, Arnon Dishon, Ayana Perelberg, Janette Bishara-Shieban, Maya Ilouze, Maya Davidovich, Shlomit Werker |
| Detection of diverse new Francisella-like bacteria in environmental samples. | Biological sciences | Cheryl R. Kuske, Paul Keim, Richard T. Okinaka, Christy C. Grow, Susan M. Brans |
| Detection of genetic markers of fecal indicator bacteria in Lake Michigan and determination of their relationship to Escherichia coli densities using standard microbiological methods. | Biological sciences | Sandra L. McLellan, Patricia A. Bower, Caitlin O. Scopel, Erika T. Jensen, Morgan M. Depas |
| Detection of infectious Crytosporidium Oocysts by cell culture immunofluorescnece assay: Applicability to environmental samples. | Biological sciences | F.M. Schets, G.B. Engels, M. During, A.M. de Roda Husman |
| Detection of Mycobacterium avium subsp. paratuberculosis in retail cheeses from Greece and the Czech Republic. | Biological sciences | Ivo Pavlik, Petra Svastova, Petr Roubal, Milan Bartos, John Ikonomopoulos, Wuhib Yayo Ayele, John Lukas, Nigel Cook, Maria Gazouli |
| Detection of Salmonella enterica in naturally contaminated liquid eggs by loop-mediated isothermal amplification, and characterization of Salmonella isolates. | Biological sciences | Yukiko Hara-Kudo, Kosuke Takatori, Kayoko Ohtsuka |
| Detection of Salmonella strains and Escherichia coli O157:H7 in feces of small ruminants and their isolation with various media. | Biological sciences | Steven Pao, Dhartika Patel, Aref Kalantari, Joseph P. Tritschler, Stephan Wildeus, Brian L. Sayre |
| Detection of the sigB gene in Bacillus cereus ATCC 14579 leads to hydrogen peroxide hyperresistance. | Biological sciences | Tjakko Abee, Willem M. de Vos, Willem van Schaik, Marcel H. Zwietering |
| Determination of the viability of Aeromonas hydrophila in different types of water by flow cytometry, and comparison with classical methods. | Biological sciences | Anna Pianetti, Tania Falcioni, Francesca Bruscolini, Luigia Sabatini, Elivio Sisti, Stefano Papa |
| Deuterium-resistant algal cell line for D labeling of heterotrophs expresses enhanced level of Hsp60 in D2O medium. | Biological sciences | Keiko Unno, Naoko Hagima, Takahiro Kishido, Shoji Okada, Naoto Oku |
| Development and application of real-time PCR assays for quantification of gene encoding tetracycline resistance. | Biological sciences | Mark Morrison, Frederick C. Michel Jr., Zhongtang Yu, Glenn Hansen, Thomas Wittum |
| Development and assessment of a real-time PCR assay for rapid and sensitive detection of a novel thermotolerant bacterium, lactobacillus thermotolerans, in chicken feces.(polymerase chain reaction) | Biological sciences | Abu Sadeque Md. Selim, Piyanuch Boonkumklao, Teruo Sone, Apinya Assavanig, Masaru Wada, Atsushi Yokota |
| Development and characterization of a subtilin-regulated expression system in Bacillus subtilis: Strict control of gene expression by addition of subtilin. | Biological sciences | Oscar P. Kuipers, Michiel Kleerebezem, Jan-Willem Veening, Roger S. Bongers, Maarten Van Wieringen |
| Development and evaluation of a broadly reactive TaqMan assay for rapid detection of hepatitis A virus. | Biological sciences | N. Jothikumar, T. L. Cromeans, M. D. Sobsey, B. H. Robertson |
| Development and evaluation of genome-probing microarrays for monitoring lactic acid bacteria. | Biological sciences | Jin-Woo Bae, Sung-Keun Rhee, Ja Ryeong Park, Won-Hyong Chung, Young-Do Nam, Insun Lee, Hongik Kim, Yong-Ha Park |
| Development and validation of PCR primers to assess the diversity of Clostridium spp. in cheese by temporal temperature gradient gel electrophoresis. | Biological sciences | Joel Dore, Anne-Gaelle Le Bourhis, Katiana Saunier, Jean-Philippe Carlier, Jean-Francosis Chamba, Michel-Robert Popoff, Jean-Luc Tholzan |
| Development of a cob-18S rRNA gene real-time PCR assay for quantifying Pfiesteria shumwayae in the natural environment. | Biological sciences | Huan Zhang |
| Development of a functional genomics platform for Sinorhizobium meliloti: Construction of an ORFeome . | Biological sciences | Brent L. House, Michael W. Mortimer, Michael L. Kahn, Brenda K. Schroeder, Svetlana N. Yurgel, Scott C. Maloney, Kristel L. Ward |
| Development of a method for markerless genetic exchange in Enterococcus faecalis and its use in construction of a srtA mutant. | Biological sciences | Gary M. Dunny, Christopher J. Kristich, Dawn A. Manias |
| Development of an F57 sequence-based real-time PCR assay for detection of Mycobacterium avium subsp. paratuberculosis in milk. | Biological sciences | R. Stephan, T. Tasara |
| Development of an immunomagnetic bead-immunoliposome fluorescence assay for rapid detection of Escherichia coli O157:H7 in aqueous samples and comparison of the assay with a standard microbiological method. | Biological sciences | Thomas R. DeCory, Richard A. Durts, Scott J. Zimmerman, Linda A. Garringer, Richard A. Montagna, Gary Paluca, Heleen H. DeCory |
| Development of a plasmid-mediated reporter system for in vivo monitoring of gene expression in the archaeon Methanosarcina acetivorans. | Biological sciences | Kevin R. Sowers, Ethel E. Apolinario, Karin M. Jackson |
| Development of a rapid assay for determining the relative abundance of bacteria. | Biological sciences | Russell J. Davenport, Thomas P. Curtis, Ian M. Head, Arlene K. Rowan, Jason R. Snape, David Fearnside, Michael R. Barer |
| Development of a rapid method for simulataneous recovery of diverse mircobes in drinking water by ultrafiltration with sodium polyphosphate and surfactants. | Biological sciences | Theresa L. Cromeans, Vincent R. Hill, Amy L. Polaczyk, Donghyun Hahn, Jothikumar Narayanan, James E. Amburgey, Jacquelin M. Roberts |
| Development of PCR assays targeting genes in O-Antigen gene clusters for detection and identification of Escherichia coli O45 and O55 serogroups.(polymerase chain reaction) | Biological sciences | Elisabeth Roberts, Michael A. Davis, Pina M. Fratamico, Chitrita Debroy, Yanhong Liu |
| Development of procedures for direct extraction of Cryptosporidium DNA from water concentrates and for relief of PCR inhibitors. | Biological sciences | Ajaib Singh, Jianlin Jiang, Kerri A. Alderision, Lihua Xiao |
| Diazotrophic diversity and distribution in the tropical and subtropical Atlantic Ocean. | Biological sciences | Julie LaRoche, Rebecca J. Langlois, Philipp A. Raab |
| Diel infection of a cyanobacterium by a contractile bacteriophage. | Biological sciences | Susan S. Golden, Barry Stein, C. Cheng Kao, Susan Green |
| Differential activities of four Lactobacillus casei promoters during bacterial transit through the gastrointestinal tracts of human-microbiota-associated micefffffff. | Biological sciences | R. Oozeer, N. Goupil-Feuillerat, G. Corthier, J.P. Furet, J. Anba, J. Mengaud |
| Differential binding of Escherichia coli O157:H7 to alfalfa, human epithelial cells, and plastic is mediated by a variety of surface structures. | Biological sciences | Ann G. Matthysse, Alfredo G. Torres, Cecelia Jeter, William Langley |
| Differential degradation of nonylphenol isomers by Sphingomonas xenophaga Bayram. | Biological sciences | Walter Giger, Hans-Peter E. Kohler, Frederic L. P. Gabriel, Klaus Guenther |
| Differential expression of the two kdp operons in the nitrogen-fixing cyanobacterium Anabaena sp. strain L-31 . | Biological sciences | Anand Ballal, Shree K. Apte |
| Differential gene expression profiling of Staphylococcus aureus cultivated under biofilm and planktonic conditions. | Biological sciences | Friedrich Gotz, Alexandra Resch, Ralf Rosenstein, Christiane Nerz |
| Differential real-time PCR assay for enumeration of lactic acid bacteria in wine. | Biological sciences | David A. Mills, Ezekiel T. Neeley, Trevor G. Phister |
| Differential sunlight sensitivity of picophytoplankton from surface Mediterranean coastal waters. | Biological sciences | Josep M. Gasol, Ruben Sommaruga, Julia S. Hofer, Laura Alonso-Saez |
| Differentiation of Campylobacter populations as demonstrated by flagellin short variable region sequences. | Biological sciences | Richard J. Meinersmann, Kelli L. Hiett, Robert W. Phillips, Paula Fedorka-Cray |
| Differentiation of spores of Bacillus subtilis grown in different media by elemental characterization using time-of-flight secondary ion mass spectrometry. | Biological sciences | John B. Cliff, Kristin H. Jarman, Nancy B. Valentine, Steven L. Golledge, Karen L. Wahl, Daniel J. Gaspar, David S. Wunschel |
| Different inactivation behaviors of MS-2 phage and Escherichia coli in TiO(sub 2) photocatalytic disinfection. | Biological sciences | Min Cho, Jeyong Yoon, Wonyong Choi, Hyenm Chung |
| Dimethylsulfoniopropionate turnover is linked to the composition and dynamics of the bacterioplankton assemblage during a microcosm phytoplankton bloom. | Biological sciences | Carlos Pedros-Alio, Jose M. Gonzalez, Rafel Simo, Mary Ann Moran, Ronald P. Kiene, Maria Vila, Jarone Pinhassi, Laura Alonso-Saez |
| Directed evolution of a thermostable phosphite dehydrogenase for NAD(P)H regeneration. | Biological sciences | Huimin Zhao, Tyler W. Johannes, Ryan D. Woodyer |
| Directed evolution of Streptomyces clavuligerus deacetoxycephalosporin C synthase for enhancement of penicillin G expansion. | Biological sciences | Chia-Li Wei, Yunn-Bor Yang, Wen-Chi Liu, Jyh-Shing Hsu, Ying-Chieh Tsai, Chan-Hui Deng, Shwu-Huey Liaw, Yu-Ching Lin |
| Direct labeling of polyphosphate at the ultrasound level in Saccharomyces cerevisiae by using the affinity of the polyphosphate binding domain of Escherichia coli exopolyphosphatase. | Biological sciences | Toshihiro Aono, Katsuharu Saito, Ryo Ohtomo, Yukari Kuga-Uetake, Masanori Saito |
| Direct microbial reduction and subsequent preservation of uranium in natural near-surface sediment. | Biological sciences | Jillian F. Banfield, Yohey Suzuki, Shelly D. Kelly, Kenneth M. Kemner |
| Discovery of glpC, an organic solvent tolerance-related gene in Escherichia coli, using gene expression profiles from DNA microarrays. | Biological sciences | Kazunori Shimuzu, Shuhei Hayashi, Takeshi Kako, Maiko Suzuki, Norihiko Tsukagoshi, Noriyuki Doukyu, Takeshi Kobayashi, Hiroyuki Honda |
| Discrimination between Francisella tularensis and Francisella-like endosymbionts when screening ticks by PCR. | Biological sciences | Jeannine M. Petersen, Kiersten J. Kugeler, Nikos Gurfield, Jean G. Creek, Kerry S. Mahoney, Jessica L. Versage |
| Discrimination efficacy of fecal pollution detection in different aquatic habitats of a high-altitude tropical country, using presumptive coliforms, Escherichia coli, and Clostridium perfringens spores. | Biological sciences | Robert L. Mach, Andreas H. Farnleitner, Denis Byamukama, Mohamad Manafi |
| Discrimination of enterobacterial repetitive intergenic consensus PCR types of Campylobacter coli and Campylobacter jejuni by Crenarchaeota. | Biological sciences | M. Prieto, D.J.M. Mouwen, M.J.B.M. Weijtens, R. Capita, C. Alonso-Calleja |
| Disinfection of microorganisms by use of electrochemically regenerated periodate. | Biological sciences | Tadashi Matsunaga, Mina Okochi, Hiroko Yokouchi, Hiroshi Yokokawa, Tatsuo Kaiho, Tae-Kyu Lim, Akira Sakuma, Tomoyuki Taguchi, Hiromichi Takahashi |
| Disintegration of Staphylococcus epidermidis biofilms under glucose-limiting conditions depends on the activity of the alternative sigma factor sigma(super B). | Biological sciences | Matthias A. Horstkotte, Holger Rohde, Sebastian Jager, Dietrich Mack, K.-M. Knobloch |
| Disruption of a cadherin gene associated with resistance to Cry1Ac delta-endotoxin of Bacillus thuringiensis in Helicoverpa armigera. | Biological sciences | Xinjun Xu, Liangying Yu, Yidong Wu |
| Dissimilatory iron reduction and odor indicator abatement by biofilm communities in swine manure microcosms. | Biological sciences | Hugo A. Castillo-Gonzalez, Mary Ann Bruns |
| Distribution and diversity of natural product genes in marine and freshwater cyanobacterial cultures and genomes. | Biological sciences | John B. Waterbury, Eric A. Webb, Ian M. Ehrenreich |
| Distribution and stability of sulfate reducing prokaryotic and hydrogenotrophic methanogenic assemblages in nutrient-impacted regions of the Florida everglades. | Biological sciences | Andrew Ogram, K.R. Reddy, Hector Castro, Susan Newman |
| Distribution, localization, and phylogeny of abundant populations of Crenarchaeota in anaerobic granular sludge. | Biological sciences | Armin Gieseke, Dirk de Beer, Gavin Collins, Leanne O'Connor, Therese Mahony, Vincent O'Flaherty |
| Distribution of Cryptosporidium genotypes in storm event water samples from three watersheds in New York. | Biological sciences | Jianlin Jiang, Lihua Xiao, Kerri A. Alderisio |
| Distribution of genes encoding putative virulence factors and fragment length polymorphisms in the vrrA gene among Brazilian isolates of Bacillus cereus and Bacillus thuringiensis. | Biological sciences | Leon Rabinovitch, Viviane Zahner, Diana Aparecida Cabral, Adriana Regua-Mangia, Gaetan Moreau, Douglas MaIntosh |
| Distribution of genes for synthesis of trehalose and mannosylglycerate in Thermus spp. and direct correlation of these genes with halotolerance. | Biological sciences | Helena Santos, Anke Henne, Nuno Empadinhas, Milton S. da Costa, Susana Alarico, Catarina Simoes, Zelia Silva, Ana Mingote |
| Distribution of the ermG gene among bacterial isolates from porcine intestinal contents. | Biological sciences | Nadja B. Shoemaker, Abigail A. Salyers, Terence R. Whitehead, Yanping Wang, Gui-Rong Wang |
| Distribution of typical freshwater bacterial groups is associated with pH, temperature, and lake water retention time. | Biological sciences | Gabriel Zwart, Eva S. Lindstrom, Miranda P. Kamst-Van Agterveld |
| Diurnal variation of cell proliferation in three bacterial taxa from coastal North Sea waters. | Biological sciences | Jakob Pernthaler, Annelie Pernthaler |
| Diversity and distribution of methanotrophic archaea at cold seeps. | Biological sciences | Rudolf Amann, Antje Boetius, Katrin Knittel, Tina Losekann, Renate Kort |
| Diversity and distribution of sulfate-reducing bacteria in permanently frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica. | Biological sciences | Laurie A. Achenbach, Michael T. Madigan, Elizabeth A. Karr, W. Matthew Sattley, Deborah O. Jung, Melissa R. Rice |
| Diversity and functional analysis of bacterial communities associated with natural hydrocarbon seeps in acidic soils at Rainbow Springs, Yellowstone National Park. | Biological sciences | David M. Ward, William P. Inskeep, Natsuko Hamamura, Sarah H. Olson |
| Diversity and structure of bacterial chemolithotrophic communities in pine forest and agroecosystem soils. | Biological sciences | G.M. King, J. Tolli |
| Diversity, localization, and physiological properties of filamentous microbes belonging to Chloroflexi subphylum I in mesophilic and thermophilic methanogenic sludge granules. | Biological sciences | Hiroyuki Imachi, Yuji Sekiguchi, Yoichi Kamagata, Akiyoshi Ohashi, Hideki Harada, Takeshi Yamada |
| Diversity of "Candidatus Liberibacter asiaticus," based on the omp gene sequence. | Biological sciences | J.M. Bove, C. Bastianel, M. Garnier-Semancik, J. Renaudin, S. Eveillard |
| Diversity of carotenoid synthesis gene clusters from environmental Enterobacteriaceae strains. | Biological sciences | Qiong Cheng, Natalia Sedkova, Luan Tao, Pierre E. Rouviere |
| Diversity of green-like and red-like ribulose-1,5-bisphosphate carboxylase/oxygenase large-subunit genes (cbbL) in differently managed agricultural soils. | Biological sciences | Michael Schmid, Anton Hartmann, Drazenka Selesi |
| Diversity of oxygenase genes from methane- and ammonia-oxidizing bacteria in the eastern Snake River plain aquifer. | Biological sciences | Janice L. Strap, Mark E. Delwiche, Frederick S. Colwell, Ronald L. Crawford, Daniel P. Erwin, Issac K. Erickson |
| Diversity of proteolytic Clostridium botulinum strains, determined by a pulsed-field gel electrophoresis approach. | Biological sciences | Hannu Korkeala, K. Johanna Bjorkroth, Mari Nevas, Sebastian Hielm, Michael W. Peck, Miia Lindstrrom |
| Diversity of the microeukaryotic community in sulfhide-rich Zodletone Spring (Oklahoma). | Biological sciences | Mostafa S. Elshahed, David C. White, Aaron D. Peacock, Fares Z. Najar, Bruce A. Roe, Lee R. Krumholz, Qingwei Luo |
| Diversity of transcripts of nitrite reductase genes (nirK and nirS) in rhizospheres of grain legumes. | Biological sciences | Shilpi Sharma, Manish Kumar Aneja, Jochen Mayer, Jean Charles Munch, Michael Schloter |
| DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter sulfurreducens. | Biological sciences | Derek R. Lovley, Barbara A. Methe, Jennifer Webster, Kelly Nevin, Jessica Butler |
| Dose determination for acute salmonella infection in pigs. | Biological sciences | D.L. Harris, A.T. Loynachan |
| Dual role of response regulator StyR in styrene catabolism regulation. | Biological sciences | Livia Leoni, Giordano Rampioni, Valeria Di Stefano, Elisabetta Zennaro |
| Dual symbiosis in a Bathymodiolus sp. mussel from a methane seep on the Gabon continental margin (Southeast Atlantic): 16S rRNA phylogeny and distribution of the symbionts in gills. | Biological sciences | Rudolf Amann, Nicole Dubilier, Sebastien Duperron, Thierry Nadalig, Jean-Claude Caprais, Myriam Sibuet, Aline Fiala-Medioni |
| Dynamics of a ribulose 1,5-biophosphate carboxylase/oxygenase gene expression in the coccolithophorid Coccolithus pelagicus during a tracer release experiment in the Northeast Atlantic. | Biological sciences | Michael Wyman, John T. Davies, Duncan A. Purdie, Sylvia Hodgson, Glen A. Tarran |
| Ecological behavior of Lactobacillus reuteri 100-23 is affected by mutation of the luxS gene. | Biological sciences | Christian Hertel, Gerald W. Tannock, Fabio Dal Bello, Salina Ghazally, Jens Water, Diane Loach, Heather Brooks, Gregory Cook, Michael Surette, Cameron Simmers, Phil Bremer |
| Ecological differentiation within a cosmopolitan group of planktonic freshwater bacteria (SOL cluster, Saprospiraceae, Bacteroidetes). | Biological sciences | Martin W. Hahn, Michael Schauer, Christian Kamenik |
| Ecology, inhibitory activity, and morphogenesis of a marine antagonistic bacterium belonging to the Roseobacter clade. | Biological sciences | Lone Gram, Mette Hjelm, Jesper Bartholin Bruhn, Kristian Fog Nielsen, Jose Bresciani, Michael Hansen, Stafan Schulz |
| Ecotypes of planktonic actinobacteria with identical 16S rRNA genes adapted to thermal niches in temperature, subtropical, and tropical freshwater habitats. | Biological sciences | Martin W. Hahn, Matthias Pockl |
| Effect of batch-process solar disinfection on survival of Cryptosporidium parvum oocysts in drinking water. | Biological sciences | F. Mendez-Hermida, J.A. Castro-Hermida, E. Ares-Mazas, Kehoe. S.C., K.G. McGuigan |
| Effect of bovine manure of Cryptosporidium parvum oocyst attachment to soil. | Biological sciences | Daniel R. Shelton, Ewa Kuczynska, Yakov Pachepsky |
| Effect of chlorine dioxide gas on fungi and mycotoxins associated with sick building syndrome. | Biological sciences | D.C. Straus, Wilson, S.C.; C. Wu, Martin, J.M.; Brasel, T.L., C.A. Jumper, L.A. Andriychuk |
| Effect of different carbon sources on community composition of bacterial enrichments from soil. | Biological sciences | Boris Wawrik, Lee Kerkhof, Jerome Kukor, Gerben Zylstra |
| Effect of direct electric current on the cell surface properties of phenol-degrading bacteria. | Biological sciences | Hui Wang, Qishi Luo, Xihui Zhang, Yi Qian |
| Effect of elevated tropospheric ozone on the structure of bacterial communities inhabiting the rhizosphere of herbaceous plants native to Germany. | Biological sciences | Christoph C. Tebbe, Anja B. Dohrmann |
| Effect of heat, acidification, and chlorination on Salmonella enterica serovar Typhimurium cells in a biofilm formed at the air-liquid interface. | Biological sciences | Sima Yaron, Keren Scher, Ute Romling |
| Effect of humic substance photodegradation on bacterial growth and respiration in lake water. | Biological sciences | George R. Aiken, Alexandre M. Anesio, Wilhelm Graneli, David J. Kieber, Kenneth Mopper |
| Effect of immersion solutions containing enterocin AS-48 on Listeria monocytogenes in vegetable foods. | Biological sciences | Antonio Galvez, Eva Valdivia, Mercedes Maqueda, Hikmate Abriouel, Antonio Cobo Molinos, Nabil Ben Omar, Rosario Lucas Lopez, Magdalena Martinez Canamero |
| Effect of iron on growth and ultrastructure of Acaryochloris marina. | Biological sciences | Robert E. Blankenship, Wesley D. Swingley, Martin F. Hohmann-Marriott, Tien Le Olson |
| Effect of L-proline on sake brewing and ethanol stress in Saccharomyces cerevisiae. | Biological sciences | Hiroshi Takagi, Miki Takaoka, Akari Kawaguchi, Yoshito Kubo |
| Effect of nutrient addition and environmental factors on prophage induction in natural populations of marine Synechococcus species. | Biological sciences | J.H. Paul, L. McDaniel |
| Effect of oxidation rate and Fe(II) state on microbial nitrate-dependent Fe(III) mineral formation. | Biological sciences | John M. Senko, Thomas A. Dewers, Lee R. Krumholz |
| Effect of pH on an in vitro model of gastric microbiota in enteral nutrition patients. | Biological sciences | George T. Macfarlane, Nigel Reynolds, Graeme A. O'May |
| Effect of preslaughter events on prevalence of Camplyobacter jejuni and Campylobacter coli in market-weight turkeys. | Biological sciences | Irene V. Wesley, Wayne T. Muraoka, Darrell W. Trampel, H. Scott Hurd |
| Effect of sand and sawdust bedding materials on the fecal prevalence of Escherichia coli O157:H7 in dairy cows. | Biological sciences | Jeffrey T. LeJeune, Michael D. Kauffman |
| Effect of temperature on anaerobic ethanol oxidation and methanogenesis in acidic peat from a northern wetland. | Biological sciences | Peter Frenzel, Martina Metje |
| Effects of aeration cycles on nitrifying bacterial populations and nitrogen removal in intermittently aerated reactors. | Biological sciences | Cesar Mota, Melanie A. Head, Jennifer A. Ridenoure, Jay J. Cheng, Francis L. de los Reyes III |
| Effects of artificial defoliation of pines on the structure and physiology of the soil fungal community of a mixed pine-spruce forest. | Biological sciences | Ken Cullings, Michael H. New, Christopher Raleigh, Joan Henson |
| Effects of bacteria on Artemia franciscana cultured in different gnotobiotic environments. | Biological sciences | Patrick Sorgeloos, Willy Verstraete, Geert Huys, Jean Swings, Antonio Marques, Thi Dinh, Christos Ioakeimidis, Jean Dhont, Peter Bossier |
| Effects of cattle feeding regimen and soil management type on the fate of Escherichia coli O157: H7 and Salmonella enterica serovar typhimurium in manure, manure-amended soil, and lettuce. | Biological sciences | Eelco Franz, Anne D.van Diepeningen, Oscar J. de Vos, Ariena H.C. Bruggen |
| Effects of common forage phenolic acids on Escherichia coli O157:H7 viability in bovine feces. | Biological sciences | V.H. Varel, J.E. Well, E.D. Berry |
| Effects of culture conditions on microorganism identification by matrix-assisted laser desorption ionization mass spectrometry. | Biological sciences | Nancy Valentine, Sharon Wunschel, David Wunschel, Catherine Petersen, Karen Wahl |
| Effects of deregulation of methionine biosynthesis on methionine excretion in Escherichia coli. | Biological sciences | Yoshihiro Usada, Osamu Kurahashi |
| Effects of dichloroethane isomers on the induction and activity of butane monooxygenase in the alkane-oxidizing bacterium Pseudomonas butanovora". | Biological sciences | P.J. Bottomley, D.M. Doughty, L.A. Sayavedra-Soto, D.J. Arp |
| Effects of dissolved sulfide, pH, and temperature on growth and survival of marine hyperthermophilic archaea. | Biological sciences | Andreas Teske, Carl O. Wirsen, Stephen J. Molyneaux, Virginia P. Edgcomb, Simone Boer, Michael S. Atkins, Karen G. Lloyd |
| Effects of diverse environmental conditions on pluLC3 prophage stability in Lactococcus system. | Biological sciences | Ingolf F. Nes, Merete Lunde, Are Halvor Aastveit, Janet Martha Blatny |
| Effects of elevated atmospheric CO2 on soil microbial biomass, activity, and diversity in a chaparral ecosystem. | Biological sciences | Walter C. Oechel, David A. Lipson, Richard F. Wilson |
| Effects of growth in the presence of subinhibitory concentrations of dicloxacillin on Staphylococcus epidermidis and Staphylococcus haemolyticus biofilms. | Biological sciences | Gerald B. Pier, Rosario Oliveira, Nuno Cerca, Silvia Martins, Sanna Sillankorva, Kimberly K. Jefferson, Joana Azeredo |
| Effects of growth medium, inoculum size, and incubation time on culturability and isolation of soil bacteria. | Biological sciences | Peter H. Janssen, Shayne J. Joseph, Kathryn E.R. Davis |
| Effects of long-term storage on plasmid stability in Bacillus anthracis. | Biological sciences | Scott Johnson, Tanja Popovic, Chung K. Marston, Alex R. Hoffmaster, Kathy E. Wilson, Sandra L. Bragg, Brain Plikaytis, Philip Brachman, Arnold F. Kaufmann |
| Effects of orally administered tetracycline on the intestinal community structure of chickens and on tet determinant carriage by commensal bacteria and Campylobacter jejuni. | Biological sciences | J. Lu, J.L. Smith, S. Sanchez, A.S. Fairchild, U. Idris, C. Hofacre, M.D. Lee |
| Effects of solar UV radiation on morphology and photosynthesis of filamentous cyanobacterium Arthrospira platensis. | Biological sciences | Virginia E. Villafane, E. Walter Helbling, Hongyan Wu, Kunshan Gao, Teruo Watanabe |
| Efficacy of removal of sucrose-supplemented interproximal plaque by electric toothbrushes in an in vitro model. | Biological sciences | M. Wilson, C.K. Hope, A. Petrie |
| Efficacy of two peroxygen-based disinfectants for inactivation of Cryptosporidium parvum oocysts. | Biological sciences | Joaquin Quilez, Caridad Sanchez-Acedo, Catalina Avendano, Emilio del Cacho, Fernando Lopez-Bernad |
| Efficacy of various pasteurization time-temperature conditions in combination with homogenization on inactivation of Mycobacterium avium subsp. paratuberculosis in milk. | Biological sciences | Irene R. Grant, Michael T. Rowe, Alan G. Williams, D. Donald Muir |
| Efficient DNA fingerprinting of Clostridium botulinum types A, B, E, and F by amplified length polymorphism analysis. | Biological sciences | Hannu Korkeala, Mari Nevas, Riikka Keto-Timonen |
| Efficient procedure for purification of obligate intracellular Wolbachia pipientis and representative amplification of its genome by multiple-displacement amplification. | Biological sciences | Pascal Simonet, Patrick Mavingui, Van Tran Van, Estelle Labeyrie, Edwinge Rances, Fabrice Vavre |
| Efficient production of L-lactic acid by metabolically engineered Saccharomyces cerevisiae with a genome-integrated L-lactate dehydrogenase gene. | Biological sciences | Haruo Takahashi, Satoshi Saitoh, Nobuhiro Ishida, Kenro Tokuhiro, Takashi Matsuyama, Katsuhiko Kitamoto |
| Electrochemical polarization-induced changes in the growth of individual cell and biofilms of Pseudomonas fluorescens (ATCC 17552). | Biological sciences | Juan Pablo Busalmen, Susana R. de Sanchez |
| Elevated temperature enhances virulence of Erwinia carotovora subsp. carotovora strain EC153 to plants and stimulates production of the quorum sensing signal, N-acyl homoserine lactone, and extracellular proteins. | Biological sciences | H. Hasegawa, A. Chatterjee, Y. Cui, A.K. Chatterjee |
| Elimination of botulinum neurotoxin (BoNT) type B from drinking water by small-scale (personal-use) water purification devices and detection of BoNT in water samples. | Biological sciences | Miia Lindstrom, Hannu Korkeala, Marja-Liisa Hanninen, Mari Nevas, Ari Horman |
| Elucidation of a carotenoid biosynthesis gene cluster encoding a novel enzyme, 2,2'-beta-hydroxylase, from Brevundimonas sp. strain SD212 and combinatorial biosynthesis of new or rare xanthophylls. | Biological sciences | Kyoko Adachi, Norihiko Misawa, Kazutoshi Shindo, Hiroaki Kasai, Yasuhiro Nishida, Yoshikazu Shizuri, Akiyoshi Sawabe, Sadao Komemushi, Wataru Miki |
| Emergence of competitive dominant ammonia-oxidizing bacterial populations in a full-scale industrial wastewater treatment plant. | Biological sciences | Gary S. Sayler, Alice C. Layton, Kevin G. Robinson, Hebe Dionisi, H.-W Kuo, Victoria M. Garrett, Arthur Meyers |
| Emission characteristics of fluorescent labels with respect to temperature changes and subsequent effects on DNA microchip studies. | Biological sciences | Wen-Tso Liu, Jer-Horng Wu, Emily Sze-Ying Li, Ezrein Shah Selamat |
| Enantioselective synthesis of S-equol from dihydrodaidzein by a newly isolated anaerobic human intestinal bacterium. | Biological sciences | Hor-Gil Hur, Xiu-Ling Wang, Je Hyeon Lee, Ki Tae Kim, Su-II Kim |
| Enantioselective transformation of alpha-hexachlorocyclohexane by the dehydrochlorinases LinA1 and LinA2 from the soil bacterium Sphingomonas paucimobilis B90A. | Biological sciences | Hans-Rudolf Buser, Thomas Poiger, Markus D. Muller, Jan Roelof van der Meer, Hans-Peter E. Kohler, Christof Holliger, Mrutyunjay Suar, Rup Lal, Andrea Hauser, Charu Dogra, Vishaka Raina |
| 'Endomicrobia': Cytoplasmic symbionts of termite gut protozoa form a separate phylum of prokaryotes. | Biological sciences | Andreas Brune, Hong Yang, Ulrich Stingl, Renate Radek |
| Endophytic colonization of Vitis vinifera L. by plant growth promoting bacterium Burkholderia sp. strain PsJN. | Biological sciences | Angela Sessitsch, Stephane Compant, Birgit Reiter, Jerzy Nowak, Christophe Clement, Essaid Ait Barka |
| Endosymbiotic Bacteroidales bacteria of the flagellated protist Pseudotrichonympha grassii in the gut of the termite Coptotermes formosanus. | Biological sciences | Toshiaki Kudo, Moriya Ohkuma, Satoko Noda, Toshiya Iida, Osamu Kitade, Hideaki Nakajima |
| Energy generation from the CO oxidation-hydrogen production pathway in Rubrivivax gelatinosus. | Biological sciences | Pin-Chang Maness, Jie Huang, Sharon Smolinski, Vekalet Tek, Gary Vanzin |
| Engineering Candida tenuis xylose reductase for improved utilization of NADH: Antagonistic effects of multiple side chain replacements and performance of site-directed mutants under simulated in vivo conditions. | Biological sciences | Barbara Petschacher, Bernd Nidetzky |
| Engineering of a novel Saccharomyces cerevisiae wine strain with a respiratory phenotype at high external glucose concentrations. | Biological sciences | C. Henricsson, R.M. Bill, Jesus M.C. de Ferreira, J. Norbeck, K. Haefalk, S. Hohmann, K. Elbing, L. Gustafsson, C. Larsson |
| Engineering of Bacillus subtilis for enhanced total synthesis of folic acid. | Biological sciences | T. Zhu, M.M. Domach, M.M. Ataai, Z. Pan, N. Domagalski, R. Koepsel |
| Engineering of Phenylacetaldehyde reductase for efficient substrate conversion in concentrated 2-Propanol. | Biological sciences | Nobuya Itoh, Yoshihide Makino, Kousuke Inoue, Tohru Dairi |
| Engineering of solvent-tolerant Pseudomonas putida S12 for bioproduction of phenol from glucose. | Biological sciences | Nick J.P. Wierckx, Hendrik Ballerstedt, Jan A.M. De Bont, Jan Wery |
| Engineering Pseudomonas fluorescens for biodegradation of 2,4-dinitrotoluene. | Biological sciences | Maria E. Alvarez, Mariela R. Monti, Andrea M. Smania, Georgina Fabro, Carlos E. Argarana |
| Enhanced hydrogen production from formic acid by formate hydrogen lyase-overexpressing Escherichia coli strains. | Biological sciences | Masayuki Inui, Hideaki Yukawa, Akihito Yoshida, Taku Nishimura, Hideo Kawaguchi |
| Enhanced reactivity of Rhizopus oryzae lipase displayed on yeast cell surfaces in organic solvents: Potential as a whole-cell biocatalyst in organic solvents. | Biological sciences | Mitsuyoshi Ueda, Seizaburo Shiraga, Masayuki Kawakami, Masaji Ishiguro |
| Enhanced survival of Salmonella enterica in vesicles released by a soilborne Tetrahymena species. | Biological sciences | M.T. Brandl, B.M. Rosenthal, A.F. Haxo |
| Enteroviruses and bacteriophages in bathing waters. | Biological sciences | Francisco Lucena, Juan Jofre, Laura Moce-Llivinia |
| Enumeration and diversity of campylobacters and bacteriophages isolated during the rearing cycles of free-range and organic chickens. | Biological sciences | A. El-Shibiny, I.F. Connerton, P.L. Connerton |
| Enumeration of respiring Pseudomonas spp. in milk within 6 hours by fluorescence in situ hybridization following formazan reduction. | Biological sciences | Masao Nasu, Akiko Kitaguchi, Nobuyasu Yamaguichi |
| Environmental contamination with vancomycin-resistant enterococci from hospital sewage in Portugal. | Biological sciences | Carla Novais, Teresa M. Coque, Helena Ferreira, Joao Carlos Sousa, Luisa Peixe |
| Environmental DNA fragment conferring early and increased sporulation and antibiotic production in Streptomyces species. | Biological sciences | Marcia S. Osburne, Asuncion Martinez, Steven J. Kolvek, Joern Hopke, Choi Lai Tiong Yip |
| Enzymatic ability of Bifidobacterium animalis subsp. lactis to hydrolyze milk proteins: Identification and characterization of endopeptidase O. | Biological sciences | C. Janer, F. Arigoni, B.H. Lee, C. Pelaez, T. Requena |
| Enzymatic and genetic characterization of carbon and energy metabolisms by deep-sea hydrothermal chemolithoautotrophic isolates of Epsilonproteobacteria. | Biological sciences | S. Craig Cary, Ken Takai, Koki Horikoshi, Barbara J. Campbell, Hanako Oida, Yohey Suzuki, Takuro Nunoura, Masae Suzuki, Hisako Hirayama, Satoshi Nakagawa, Fumio nagaki |
| Enzyme-coupled assay for beta-xylosidase hydrolysis of natural substrates. | Biological sciences | Kurt Wagschal, Diana Franqui-Espiet, Charles C. Lee, George H. Robertson, Dominic W.S. Wong |
| Epidemiology of Cryptosporidium molnari in Spanish gilthead sea bream (Sparus aurata L.) and European sea bass (Dicentrarchus labrax L.) cultures: From hatchery to market size. | Biological sciences | A. Sitja-Bobadilla, F. Padros, C. Aguilera, P. Alvarez-Pellitero |
| Epoxide formation on the aromatic B ring flavanone by biphenyl dioxygenase of pseudomonas pseudoalcaligenes KF707. | Biological sciences | Jaehong Han, Song-Young Kim, Jihyun Jung, Yoongho Lim, Joong-Hoon Ahn, Su-Il Kim, Hor-Gil Hur |
| Equine and canine Anaplasma phagocytophilum strains isolated on the Island of Sardinia (Italy) are phylogenetically related to pathogenic strains from the United States. | Biological sciences | Alberto Alberti, Maria Luisa Pinna Parpaglia, Rosanna Zobba, Tiziana Cubeddu, Bernardo Chessa, Gianpaolo Pintori, Maria Filippa Addis, Marco Pittau, Olivier Sparagano |
| Erosion and subsequent transport state of Escherichia coli from cowpats. | Biological sciences | Richard William Muirhead, Philip James Bremer, Robert Peter Collins |
| Escherichia coli behavior in the presence of organic matter released by algae exposed to water treatment chemicals. | Biological sciences | P. Hartemann, L. Mathieu, Boutelux, C.; Saby, S., D. Tozza, J. Cavard, V. Lahoussine |
| Escherichia coli K1's capsule is a barrier to bacteriophage T7. | Biological sciences | Sankar Adhya, Dean Scholl, Carl Merril |
| Escherichia coli O157:H7 in environments of culture-positive cattle. | Biological sciences | John Carpenter, Margaret A. Davis, Carolyn J. Hovde, Karen A. Cloud-Hansen |
| Establishment of Tn5096-based transposon mutagenesis in Gordonia polyisoprenivorans. | Biological sciences | Alexander Steinbuchel, Matthias Arenskotter, Quyen Banh |
| European origin of Bradyrhizobium populations infecting lupins and serradella in soils of Western Australia and South Africa. | Biological sciences | Lionel Moulin, Tomasz Stepkowski, Agnieszka Kryzanska, Alison McInnes, Ian J. Law, John Howieson |
| Evaluation of agar plates for direct enumeration of Campylobacter spp. from poultry carcass rinses. | Biological sciences | Omar A. Oyarzabal, Kenneth S. Macklin, James M. Barbaree, Robert S. Miller |
| Evaluation of gel-pad oligonucleotide microarray technology by using artificial neural networks. | Biological sciences | Peter A. Noble, Alex Pozhitkov, Boria Chernov, Gennadiy Yershov |
| Evaluation of new broth media for microdilution antibiotic susceptibility testing of Lactobacilli, Pediococci, Lactococci, and bifidobacteria. | Biological sciences | Geert Huys, Jean Swings, Marc Vancanneyt, Ingo Klare, Carola Konstabel, Sibylle Muller-Bertling, Rolf Reissbrodt, Herman Goossens, Wolfgang Witte |
| Evidence for aceticlastic methanogenesis in the presence of sulphate in a gas condensate-contaminated aquifer. | Biological sciences | Christopher Struchtemeyer, Mostafa S. Elshaded, Kathleen E. Duncan, Micheal J. McInerney |
| Evidence for aceticlastic methanogenesis in the presence of sulphate in a gas condensate-contaminated aquifer. | Biological sciences | Christopher Struchtemeyer, Mostafa S. Elshaded, Micheal J. McInerney |
| Evidence for a functional quorum-sensing type AI-1 system in the extremophilic bacterium Acidithiobacillus ferrooxidans. | Biological sciences | Nicolas Guiliani, Carlos A. Jerez, Carolina Farah, Mario Vera, Daniele Morin, Dominique Haras |
| Evidence for horizontal transfer of 1-aminocyclopropane-1-carboxylate deaminase genes. | Biological sciences | N. Hontzeas, A.O. Richardson, A. Belimov, V. Safronova, M.M. Abu-Omar, B.R. Glick |
| Evidence for involvement of an electron shuttle in electricity generation by Geothrix fermentans. | Biological sciences | Daniel R. Bond, Derek R. Lovley |
| Evidence for the presence of an alternative glucose transport system in Clostridium beijerinckii NCIMB 8052 and the solvent-hyperproducing mutant BA101. | Biological sciences | Martin Tangney, Wilfrid J. Mitchell, Jieun Lee, Blaschek H. P. |
| Evidence of intense archeal and bacterial methanotrophic activity in the Black Sea water column. | Biological sciences | Bernhard Wehrli, Edith Durisch-Kaiser, Lucia Klauser, Carsten Schubert |
| Exogenous isoleucine and fatty acid shortening ensure the high content of enteiso-C(sub 15:0) fatty acid required for Listeria monocytogenes. | Biological sciences | Brian J. Wilkinson, Kun Zhu, Xiang Ding, Mudcharee Julotok |
| Explorative multifactor approach for investigating global survival mechanisms of Campylobacter jejuni under environmental conditions. | Biological sciences | Knut Rudi, Birgitte Moen, Astrid Oust, Oyvind Langsrud, Nick Dorrell, Achim Kohler, Bredan W. Wren, Gemma L. Marsden, Jason Hinds |
| Exposure to cadmium elevates expression of genes in the OxyR and OhrR regulons and induces cross-resistance to peroxide killing treatment in Xanthomonas campestris. | Biological sciences | Paiboon Vattanaviboon, Skorn Mongkolsuk, Peerakan Banjerdkij |
| Expression of 17 genes in Clostridium thermocellum ATCC 27405 during fermentation of cellulose or cellobiose in continuous culture. | Biological sciences | Paul J. Weimer, David M. Stevenson |
| Expression of 3-Ketoacyl-Acyl carrier protein reductase (fabG) genes enhances production of polyhydroxyalkanoate copolymer from glucose in recombinant Escherichia coli JM109. | Biological sciences | Yoshiharu Doi, Christopher T. Nomura, Kazunori Taguchi, Zhihua Gan, Kazuhiro Kuwabara, Tomoyo Tanaka, Kazuma Takase |
| Expression of abrB310 and sinR, and effects of decreased abrB310 expression on the transition from acidogenesis to solventogenesis, in clostridium acetobutylicum ATCC 824. | Biological sciences | George N. Bennett, Frederick B. Rudolph, Miles C. Scotcher |
| Expression of nitrite and nitric oxide reductases in free-living and plant-associated Agrobacterium tumefaciens C58 cells. | Biological sciences | James P. Shapleigh, Seung-Hun Baek |
| Expression of rumen microbial fibrolytic enzyme genes in probiotic Lactobacillus reuteri. | Biological sciences | Xin Zhao, Je-Ruei Liu, Bi Yu, Fu-Hwa Liu, Kuo-Joan Cheng |
| Expression of the nifH gene of a Herbaspirillum endophyte in wild rice species: Daily Rhythm during the light-dark cycle. | Biological sciences | Kiwamu Minamisawa, Hisayuki Mitsui, Tsuyoshi Isawa, Asami Saito, Mu You, Tomohiro Nishiguchi |
| Expression of the psl operon in pseudomonas aeruginosa PAO1 biofilms: PsIA performs an essential function in biofilm formation. | Biological sciences | Bernd H.A. Rehm, Jeremy S. Webb, Jorg Overhage, Mirle Schemionek |
| Extensive diversity of ionizing-radiation-resistant bacteria recovered from Sonoran Desert soil and description of nine new species of the genus Deinococcus obtained from a single soil sample. | Biological sciences | Peter Kampfer, Milton S. da Costa, Fred A. Rainey, Nicole C. Shank, Keren Ray, Ashlee M. Earl, Alanna M. Small, Margarida Ferreira, Mie-Jung Park, Margaret C. Henk, Bridget Z. Gatz, Brian A. Rash, John R. Battista, M. Fernanda Nobre, Danielle Bagaley |
| Extracellular DNA in single- and multiple-species unsaturated biofilms. | Biological sciences | R.E. Steinberger, P.A. Holden |
| Facilitation of expression and purification of an antimicrobial peptide by fusion with baculoviral polyhedrin in Escherichia coli. | Biological sciences | Quande Wei, Young Soo Kim, Jeong Hyun Seo, Woong Sik Jang, In Hee Lee, Hyung Joon Cha |
| Factors associated with the presence of coliforms in the feed and water of feedlot cattle. | Biological sciences | Michael W. Sanderson, Jan M. Sargeant, Robert A. Smith, David G. Renter, Dee D. Griffin |
| Factors influencing germination of Bacillus subtilis spores via activation of nutrient receptors by high pressure. | Biological sciences | Peter Setlow, Jie Wei, Barbara Setlow, Elaine P. Black, Donnamaria E. Cortezzo, Kasia Koziol-Dibe, Dallas G. Hoover, Dongsheng Guan |
| Factors influencing the ability of Listeria monocytogenes to pass through a membrane filter by active infiltration. | Biological sciences | Tohey Matsuyama, Kentaro Nakazawa, Hiroyki Hasegawa, Yoji Nakagawa, Michinori Terao |
| Farnesol concentrations required to block germ tube formation in Candida albicans in the presence and absence of serum. | Biological sciences | Jacob M. Hornby, Kenneth W. Nickerson, Daniel D. Mosel, Raluca Dumitru, Audrey L. Atkin |
| Fate and role of ammonium ions fermentation of citric acid by Aspergillus niger. | Biological sciences | Maria Papagianni, Frank Wayman, Michael Mattey |
| Fate of Escherichia coli during ensiling of wheat and corn. | Biological sciences | Y. Chen, S. Sela, M. Gamburg, R. Pinto, Z.G. Weinberg |
| Fate of pathogens present in livestock wastes spread onto fescue plots. | Biological sciences | D. John I. Thomas, Mike L. Hutchison, Lisa D. Walters, Tony Moore, Sheryl M. Avery |
| Fecal microbiota composition and frailty. | Biological sciences | H.J.M. Harmsen, Gjalt W. Welling, Sandra P. van Tongeren, Joris P.J. Slaets |
| Feedback inhibition of chorismate mutase/prephenate dehydrogenase (TyrA) of Escherichia coli: Generation and characterization of tyrosine-insensitive mutants. | Biological sciences | Gregory Stephanopoulos, Tina Lutke-Eversloh |
| Feedback-resistant acetohydroxy acid synthase increases valine production in Corynebacterium glutamicum. | Biological sciences | Miroslav Patek, Veronika Elisakova, Jiri Holatko, Jan Nesvera, Damien Leyval, Jean-Louis Goergen, Stephane Delaunay |
| Fermentation of fructooligosaccharides and inulin by bifidobacteria: A comparative study of pure and fecal cultures. | Biological sciences | Maddalena Rossi, Simona Zanoni, Claudio Corradini, Diego Matteuzzi, Alberto Amaretti, Marcello Nicolini, Anna Pompei |
| Fingerprinting of Bacillus thuringiensis type strains and isolates by using Bacillus cereus group-specific repetitive extragenic palindromic sequence-based PCR analysis. | Biological sciences | Jorge E. Ibarra, Arturo Reyes-Ramirez |
| First archaeal inorganic polyphosphate/ATP-dependent NAD kinase, from hyperthermophilic archaeon pyrococcus horikoshii: Cloning, expression, and characterization. | Biological sciences | Haruhiko Sakuraba, Ryushi Kawakami, Toshihisa Ohshima |
| First detection and genotyping of human-associated microsporidia in pigeons from urban parks. | Biological sciences | M. Haro, F. Izquierdo, N. Henriques-Gil, I. Andres, F. Alonso, S. Fenoy, C. del Aguila |
| First genome data uncultured upland soil cluster alpha methanotrophs provide further evidence for a close phylogenetic relationship to Methylocapsa acidiphila B2 and for high-affinity methanotrophy involving particulate methane mononxygenase. | Biological sciences | Werner Liesack, Peter Ricke, Richard Reinhardt, Michael Kube, Christoph Erkel, Satoshi Nakagawa |
| First record of the rare species Aeromonas culicicola from a drinking water supply. | Biological sciences | M. Navarro, M.J. Figueras, A. Suarez-Franquet, M.R. Chacon, L. Soler, C. Alejandre, A.J. Martinez-Murcia, J. Guarro |
| FlhA influences Bacillus thuringiensis PlcR-regulated gene transcription, protein production, and virulence. | Biological sciences | Nathalie Gilois, Didier Lereclus, Christina Nielsen-LeRoux, Laurent Bouillaut, Nalini Ramarao, Christophe Buisson, Michel Gohar |
| FLO11-based model for air-liquid interfacial biofilm formation by Saccharomyces cerevisiae. | Biological sciences | Alan T. Bakalinsky, Severino Zara, Giacomo Zara, Giorgia Pirino, Maria Antonietta Demontis |
| Flow-cytometric cell sorting and subsequent molecular analyses for culture-independent identification of bacterioplankton involved in dimethylsulfoniopropionate transformations. | Biological sciences | Jose M. Gonzalez, Mary Ann Moran, Robert E. Hodson, Xiaozhen Mou, Ramunas Stepanauskas |
| Flurophore-labeled primers improve the sensitivity, versatility, and normalization of denaturing gradient gel electrophoresis. | Biological sciences | William W. Mohn, Josh D. Neufeld |
| Folate cross-feeding supports symbiotic homoacetogenic spirochetes. | Biological sciences | Joseph R. Graber, John A. Breznak |
| Formation of catechols via removal of acid side chains from ibuprofen and related aromatic acids. | Biological sciences | Anthony G. Hay, Robert W. Murdoch |
| Formation of trans fatty acids is not involved in growth-linked membrane adaptation of Pseudomonas putida. | Biological sciences | Hauke Harms, Claus Hartig, Norbert Loffhagen |
| Functional analysis of putative adhesion factors in Lactobacillus acidophilus NCFM. | Biological sciences | Todd R. Klaenhammer, Eric Altermann, B. Logan Buck, Tina Svingerud |
| Functional analysis of three plasmids from Lactobacillus plantarum. | Biological sciences | Richard van Kranenburg, Roland J. Siezen, Michiel Kleerebezem, Willem M. de Vos, Natasa Golic, Roger Bongers, Rob J. Leer |
| Functional characterization of the proteolytic system of Lactobacillus sanfranciscensis DSM 20451 during growth in sourdough. | Biological sciences | Matthias A. Ehrmann, Rudi F. Vogel, Michael G. Ganzle, Melanie Pavlovic, Nicoline Vermeulen |
| Functional characterization of two cytochrome P450 monooxygenase genes, P450-1 and P450-4, of the gibberellic acid gene cluster in Fusarium proliferatum (Gibberella fujikuroi MP-D). | Biological sciences | S. Malonek, M.C. Rojas, P. Hedden, P. Gaskin, P. Hopkins, B. Tudzynski |
| Functional importance of deletion mutant genotypes in an insect nucleopolyhedrovirus population. | Biological sciences | Trevor Williams, Oihane Simon, Miguel Lopez-Ferber, Primitivo Caballero |
| Function of the cypX and moxY genes in aflatoxin biosynthesis in Aspergillus parasiticus. | Biological sciences | Kimiko Yabe, Ying Wen, Hidemi Hatabayashi, Hatsue Arai, Hiroko K. Kitamoto |
| Fungal community analysis by large-scale sequencing of environmental samples. | Biological sciences | Heath E. O'Brien, Jeri Lynn Parrent, Jason A. Jackson, Jean-Marc Moncalvo, Rytas Vilgalys |
| Gene cluster responsible for validamycin biosynthesis in Streptomyces hygroscopicus subsp. jinggangensis 5008. | Biological sciences | Xiufen Zhou, Yi Yu; Floss, Heinz G., Linquan Bai, Taifo Mahmud, Kazuyuki Minagawa, Erhu Cao, Xiaohong Jian, Shuangya Chen, Lei Li, Jialiang Li |
| Generation and molecular characterization of new temperature-sensitive plasmids intended for genetic engineering of Pasteurellaceae. | Biological sciences | Robert E. Briggs, Fred M. Tatum |
| Generation and phenotypic characterization of Aspergillus nidulans methylisocitrate lyase deletion mutants: Methylisocitrate inhibits growth and conidiation. | Biological sciences | Matthias Brock |
| Genes and enzymes involved in bacterial oxidation and reduction of inorganic arsenic. | Biological sciences | Le T. Phung, Simon Silver |
| Genes involved in formation and attachment of a two-carbon chain as a component of eurekanate, a branched-chain sugar moiety of avilamycin A. | Biological sciences | Irina Treede, Gerd Hauser, Agnes Muhlenweg, Carsten Hofmann, Maraike Schmidt, Gabriele Weitnauer, Steffen Glaser, Andreas Bechthold |
| Genes involved in SkfA killing factor production protect a Bacillus subtilis lipase against proteolysis. | Biological sciences | Jan Maarten van Dijl, Hirofumi Yoshikawa, Haike Antelmann, Peter G. Braun, Helga Westers, Wim J. Quax, Michael Hecker, Teruo Tanaka, Lidia Westers, Jan D.H. Longbloed |
| Gene structure and transcriptional organization of the dnaK operon of Bifidobacterium breve UCC 2003 and application of the operon in Bifidobacterial tracing. | Biological sciences | Marco Ventura, Ralf Zink, Gerald F. Fintzgerald, Douwe Sinderen |
| Genetically engineered wine yeast produces a high concentration of L-lactic acid of extremely high optical purity. | Biological sciences | Haruo Takahashi, Satoshi Saitoh, Nobuhiro Ishida, Kenro Tokuhiro, Katsuhiko Kitamoto, Toru Onishi, Eiji Nagamori |
| Genetic analysis of biosurfactant production in Ustilago maydis. | Biological sciences | Michael Bolker, Sandra Hewald, Katharina Josephs |
| Genetic analysis of two bile salt hydrolase activities in Lactobacillus acidophilus NCFM. | Biological sciences | Todd R. Klaenhammer, Olivia McAuliffe, Raul J. Cano |
| Genetic and phylogeographic structures of the symbiotic fungus Tuber magnatum. | Biological sciences | Andrea Rubini, Francesco Paolocci, Claudia Riccioni, Giovanni G. Vendramin, Sergio Arcioni |
| Genetic and transcriptional organization of the clpC locus in Bifidobacterium breve UCC 2003. | Biological sciences | Douwe van Sinderen, Gerald F. Fitzgerald, Marco Ventura |
| Genetic characterization of accumulation of polyhydroxyalkanoate from styrene in pseudomonas putida CA-3. | Biological sciences | Niall D. O'Leary, Kevin E. O'Connor, Alan D.W. Dobson, Patrick Ward, Miriam Goff |
| Genetic characterization of the Bifidobacterium breve UCC 2003 hrcA locus. | Biological sciences | Gerald F. Fitzgerald, Erasmo Neviani, Marco Ventura, Franco Dellaglio, Carlos Canchaya, Valentina Bernini, Antonio Del Casale, Douwe Van Sinderen |
| Genetic determinants of volatile-thiol release by saccharomyces cerevisiae during wine fermentation. | Biological sciences | Isak S. Pretorius, Kate S Howell, Mathais Kelin, Swiegers, Gordon M Elsey, Yoji Hayasaka, Fleet, Peter B. Hoj, Miguel A. de Barros Lopes |
| Genetic diversity and antibiotic resistance patterns in a Campylobacter population isolated from poultry farms in Switzerland. | Biological sciences | J. Keller, B. Bissig-Choisat, M. Wittwer, T. M. Wassenaar, R. Stephan, D. Howald, G. Regula |
| Genetic diversity and horizontal transfer of genes involved in oxidation of reduced phosphorus compound by Alcaligenes faecalis WM2072. | Biological sciences | William W. Metcalf, Marlena M. Wilson |
| Genetic diversity in the lactose operons of Lactobacillus helveticus strains and its relationship to the role of these strains as commercial starter cultures. | Biological sciences | R.P. Ross, M.J. Callanan, T.P. Beresford |
| Genetic diversity of benzoyl coenzyme reductase genes detected in denitrifying isolates and estuarine sediment communities. | Biological sciences | Bongkeun Song, Bess B. Ward |
| Genetic diversity of Cylindrospermopsis strains (cyanobacteria) isolated from Four continents. | Biological sciences | Jean-Francois Humbert, Muriel Gugger, Renato Molica, Brigitte Le Berre, Philippe Dufour, Cecile Bernard |
| Genetic diversity of Listeria monocytogenes strains from a high-prevalence dairy farm. | Biological sciences | Douglas R. Call, James Reynolds, Monica K. Borucki, Clive C. Gay, Donald P. Knowels, Katherine L. McElwain, So Hyun Kim |
| Genetic diversity of small eukaryotes in lakes differing by their tropic status. | Biological sciences | Aurelie Thenot, Didier Debroas, Marie Lefranc, Cecile Lepere |
| Genetic diversity of viable, injured, and dead fecal bacteria assessed by fluorescence-activated cell sorting and 16S rRNA gene analysis. | Biological sciences | Tjakko Abee, Elaine E. Vaughan, Hauke Smidt, Willem M. de Vos, Kaouther Ben-Amor, Hans Heilig |
| Genetic loci of major antigenic protein of Edwardsiella tarda. | Biological sciences | Noel Verjan, Ikuo Hirono, Takashi Aoki |
| Genetic similarity of flag shoot and ascopore subpopulations of Erysiphe necator in Italy. | Biological sciences | Paolo Cortesi, Michael G. Milgroom, Anna Mazzoleni, Cristina Pizzatti |
| Genetic variability of the heme uptake system among different strains of the fish pathogen Vibrio anguillarum: Identification of a new heme receptor. | Biological sciences | Carlos R. Osorio, Manuel L. Lemos, Susana Mourino, Isabel Rodriguez-Ares |
| Genetic variation among Staphylococcus aureus strains from Norwegian bulk milk. | Biological sciences | H.J. Jorgensen, T. Mork, D.A. Caugant, A. Kearns, L.M. Rorvik |
| Genetic variation of the bloom-forming cyanobacterium microcystis aeruginosa within and among lakes: Implications from harmful algal blooms. | Biological sciences | Brett A. Neilan, Mark E. Hay, Alan E. Wilson, Orlando Sarnelle, Tim P. Salmon, Michelle Gehringer |
| Genome-directed isolation of the key nitrogen fixer Leptospirillum ferrodiazotrophum sp. nov. from an acidophilic microbial community. | Biological sciences | Philip Hugenholtz, Jillian F. Banfield, Gene W. Tyson, Brett J. Baker, Eric E. Allen, Ian Lo |
| Genome transcriptional variation within and between steady states for continuous growth of the hyperthermophile Thermotoga maritima. | Biological sciences | Robert M. Kelly, Keith R. Shockley, Shannon B. Conners, Clemente I. Montero, Marybeth A. Pysz, Matthew Johnson, Kevin L. Scott, Russell Wolfinger |
| Genomic analysis of bacteriophage (phi)JL001: Insights into its interaction with a sponge-associated alpha-Proteobacterium. | Biological sciences | Russell T. Hill, Feng Chen, Jayme E. Lohr |
| Genomic and phylogenetic characterization of luminous bacteria symbiotic with the deep-sea fish Chlorophthalmus albatrossis (aulopiformes: Chlorophthalmidae). | Biological sciences | Paul V. Dunlap, Jennifer C. Ast |
| Genomic comparison of plant pathogenic and nonpathogenic Serratia marcescens strains by suppressive subtractive hybridization. | Biological sciences | Q. Zhang, U. Melcher, L. Zhou, F.Z. Najar, B.A. Roe, J. FLetcher |
| Genomic comparisons of Salmonella enterica serovar Dublin, Agona, and Typhimurium strains recently isolated from milk filters and bovine samples from Ireland, using a Salmonella microarray. | Biological sciences | S. Fanning, B.P. Murphy, F.J. Reen, E.F. Boyd, S. Porwollik, D. Gilroy, M. McClelland |
| Genomic diversity of Campylobacter coli and Campylobacter jejuini isolates recovered from free-range broiler farms and comparison with isolates of various origins. | Biological sciences | K. Rivoal, C. Ragimbeau, G. Salvat, P. Colin, G. Ermel |
| Genomic DNA amplification from a single bacterium. | Biological sciences | Arumugham Raghunathan, Harley R. Ferguson Jr., Carole J. Bornarth, Wanmin Song, Mark Driscoll, Roger S. Lasken |
| Genomic islands in the Cornyebacterium efficiens genome. | Biological sciences | Ren Zhang, Chun-Ting Zhang |
| Geobacteraceae community composition is related to hydrochemistry and biodegradation in an iron-reduced aquifer polluted by a neighboring landfillGeobacteraceae community composition is related to hydrochemistry and biodegradation in an iron-reduced aquifer polluted by a neighboring landfill. | Biological sciences | Hans V. Westerhoff, Wilfred F.M. Roling, Martin Braster, Henk W. van Verseveld, Boris M. van Breukelen, Bin Lin |
| Geographic and environmental sources of variation in lake bacterial community composition. | Biological sciences | Eric W. Triplett, Anthony C. Yannarell |
| gerR, a novel ger operon involved in L-alanine-and inosine-initiated germination of Bacillus cereus ATCC 14579. | Biological sciences | Tjakko Abee, Willem M. de Vos, Luc M. Hornstra, Ynte P. de Vreis, Marjon H.J. Wells-Bennik |
| Gibberella xylarioides sensu lato from Coffea canephora: A new mating population in the Gibberella fujikuroi species complex. | Biological sciences | Pascale C.E. Lepoint, Francoise T.J. Manaut, Henri M.M. Maraite |
| Global transcriptional profiling of Shewanella oneidensis MR-1 during Cr(VI) and U(VI) reduction. | Biological sciences | Bradley M. Tebo, Craig S. Criddle, Jizhong Zhou, Rizlan Bencheikh-Latmani, Sarah Middleton Williams, Lisa Haucke, Liyou Wu |
| Glutamine synthesis is essential for growth of Streptococcus thermophilus in milk and is linked to urea catabolism. | Biological sciences | Diego Mora, Christophe Monnet, Georges Corrieu |
| Growth and grazing mortality rates of phylogenetic groups of bacterioplankton in coastal marine environments. | Biological sciences | Taichi Yokokawa, Toshi Nagata |
| Growth and multiplexed analysis of microorganisms on a subdivided, highly porous, inorganic chip manufactured from Anopore. | Biological sciences | Colin J. Ingham, Maaike Van Den Ende, Dirk Pijnenburg, Peter C. Wever, Peter M. Schneeberger |
| Habits of magnetosome crystals in coccoid magnetotactic bacteria. | Biological sciences | Ulysses Lins, Martha R. McCartney, Marcos Farina, Richard B. Frankel, Peter R. Buseck |
| Halotolerant cyanobacterium alphanothece halophytica contains NapA-type Na+/H+ antiporters with novel ion specificity that are involved in salt tolerance at alkaline pH. | Biological sciences | Tatsunosuke Nakamura, Yoshito Tanaka, Nuchanat Wutipraditkul, Rungaroon Waditee, Aran Incharoensakdi, Takashi Hibino, Masamitsu Shikata, Tetsuko Takabe, Teruhiro Takabe |
| Heat inactivation of Mycobacterium avium subsp. paratuberculosis in milk. | Biological sciences | Wendy L. McDonald, Kimberly J. O'Riley, Christopher J. Schroen, Robin J. Condron |
| Heme-dependent rubber oxygenase RoxA of Xanthomonas sp. cleaves the carbon backbone of poly(cis-1,4-isoprene) by a dioxygenase mechanism. | Biological sciences | Dieter Jendrossek, Reinhard Braaz, Wolfgang Armbruster |
| Heterogeneity of putative surface layer proteins in Lactobacillus helveticus. | Biological sciences | Giorgio Giraffa, Monica Gatti, Lia Rossetti, Erasmo Neviani, Maria Emanuela Fornasari, Camilla Lazzi |
| Heterogeneity of times required for germination and outgrowth from single spores of nonproteolytic Clostridium botulinum. | Biological sciences | Michael W. Peck, Carmen Pin, Sandra C. Stringer, Martin D. Webb, Susan M. George |
| Heterologous expression of novobiocin and clorobiocin biosynthetic gene clusters. | Biological sciences | Keith F. Chater, Bertolt Gust, Ute Galm, Alessandra S. Eustaquio, Shu-Ming Li, Lutz Heide |
| Heterologous expression, purification, and characterization of a highly active xylose reductase from Neurospora crassa. | Biological sciences | Wilfred A. van der Donk, Ryan Woodyer, Michael Simurdiak, Huimin Zhao |
| Heterologous leaky production of transglutaminase in Lactococcus lactis significantly enhances the growth performance of the host. | Biological sciences | Jian Chen, Yin Li, Rui-Yan Fu |
| Heterologous production, assembly, and secretion of a minicellulosome by Clostridium acetobutylicum ATCC 824. | Biological sciences | Chantal Tardif, Henri-Pierre Fierobe, Jean-Pierre Belaich, Florence Mingardon, Stephanie Perret, Anne Belaich |
| Heterologous production of antimicrobial peptides in Propionibacterium freudenreichii. | Biological sciences | Ingolf F. Nes, Therese Faye, Helge Holo, Dag Anders Brede, Melanie Patricia Stierli, Gottfried Dasen, Anita Theiler, Leo Meile |
| Heterologous production of functional forms of Rhizopus oryzae lipase in Escherichia coli. | Biological sciences | Michael Haas, Aurelio Hidalgo, Mirella Di Lorenzo, Uwe T. Bornscheuer |
| High-frequency conjugation system facilitates biofilm foundation and pAMbeta1 transmission by Lactococcus lactis. | Biological sciences | Hongliang Luo, Kai Wan, Hua H. Wang |
| High-level acetaldehyde production in Lactococcus lactis by metabolic engineering. | Biological sciences | Michiel Kleerebezem, Marcel H.N. Hoefnagel, Roger S. Bongers |
| High-level overproduction of His-tagged Tth DNA polymerase in Thermus thermophilus. | Biological sciences | Renata Moreno, Jose Berenguer, Amparo Haro, Angel Castellanos |
| Highly divergent genes for methanopterin-linked C1 transfer reactions in Lake Washington, assessed via metagenomic analysis and mRNA detection. | Biological sciences | Mary E. Lidstrom, Olivier Nercessian, Marina G. Kalyuzhnaya, Ludmila Chistoserdova, Sarah Bowerman |
| High motility reduces grazing mortality of planktonic bacteria. | Biological sciences | Carsten Matz, Klaus Jurgens |
| High-pressure inactivation of hepatitis A virus within oyster. | Biological sciences | David H. Kingsley, Kevin R. Calci, Gloria K. Meade, Robert C. Tezloff |
| High prevalence of VanA-type vancomycin-resistant enterococci in Austrian poultry. | Biological sciences | Alexandra Eisner, Egon Marth, Gebhard Feierl, Josef Kofer, Gregor Gorkiewicz, Franz Dieber, Harald H. Kessler |
| High-temperature fluorescent in situ hybridization for detecting Escherichia coli in seawater samples, using rRNA-targeted oligonucleotide probes and flow cytometry. | Biological sciences | Ying Zhong Tang, Karina Yew Hoong Gin, Tok Hoon Lim |
| High-temperature-induced transposition of insertion elements in Burkholderia multivorans ATCC 17616. | Biological sciences | Yuji Nagata, Masataka Tsuda, Yoshiyuki Ohtsubo, Hiroyuki Genka |
| Histamine-producing pathway encoded on an unstable plasmid in Lactobacillus hilgardii 0006. | Biological sciences | Juke S. Lolkema, Aline Lonvaud-Funel, Patrick M. Lucas, Wout A.M. Wolken, Olivier Claisse |
| Homologous and heterologous overexpression in Clostridium acetobutylicum and characterization of purified clostridial and algal Fe-only hydrogenases with high specific activities. | Biological sciences | Laurence Girbal, Christian Croux, Philippe Soucaille, Isabelle Meynial-Salles, Gregory von Abendroth, Martin Winkler, Thomas Happe, Paul M.C. Benton, John W. Peters |
| Horizontal gene transfer to endogenous endophytic bacteria from poplar improves phytoremediation of toluene. | Biological sciences | Jaco Vangronsveld, Tanja Barac, Safiyh Taghavi, Brigitte Borremans, Bill Greenberg, Daniel van der Lelie |
| Horizontal transfer of bacterial symbionts: Heritability and fitness effects in a novel aphid host. | Biological sciences | Nancy A. Moran, Jacob A. Russell |
| Host distributions of uncultivated fecal bacteroidales bacteria reveal genetic markers for fecal source identification. | Biological sciences | Anne E. Bernhard, Katharine G. Field, Joyce M. Simpson, Linda K. Dick, Timothy J. Brodeur, Jorge W. Santo Domingo, Sarah P. Walters |
| Host species-specific metabolic fingerprint database for enterococci and Escherichia coli and its application to identify sources of fecal contamination in surface waters. | Biological sciences | M. Katouli, W. Ahmed, R. Neller |
| Hydroxylation and carboxylation-Two crucial steps of anaerobic benzene degradation by Dechloromonas strain RCB. | Biological sciences | John D. Coates, Romy Chahraborty |
| Hydroxylation of the herbicide isoproturon by fungi isolated from agricultural soil. | Biological sciences | Jens Aamand, Stig Ronhede, Bo Jensen, Soren Rosendahl, Birthe B. Kragelund, Rene K. Juhler |
| Identification and characterization of a novel biotin biosynthesis gene in Saccharomyces cerevisiae. | Biological sciences | Hong Wu, Kiyoshi Ito, Hitoshi Shimoi |
| Identification and characterization of di- and tripeptide transporter DtpT of Listeria monocytogenes EGD-e. | Biological sciences | Jeroen A. Wouters, Tjakko Abee, Trinad Chakraborty, Torsten Hain, Ajub Darji, Eric Hufner, Henrike Wemekamp-Kamphuis |
| Identification and characterization of putative virulence genes and gene clusters in Aeromonas hydrophila PPD134/91. | Biological sciences | K.Y. Leung, Y.L. Zhang, H.B. Yu, Y.L. Lau, F. Yao, S. Vilches, S. Merino, J.M. Tomas, S.P. Howard |
| Identification and localization of extraradicular biofilm-forming bacteria associated with refractory endodontic pathogens. | Biological sciences | Mobuo Noguchi, Yuichiro Noiri, Masahiro Narimatsu, Shigeyuki Ebisu |
| Identification and molecular characterization of the chromosomal exopolysaccharide biosynthesis gene cluster from Lactococcus lactis subsp. cremoris SMQ-461. | Biological sciences | N. Dabour, G. LaPointe |
| Identification and molecular epidemoilogy of Campylobacter coli isolates from human gastroenteritis, food, and animal sources by amplified fragment length polymorphism analysis and Penner serotyping. | Biological sciences | S.L.W. On, B.L. Siemer, E.M. Neilsen |
| Identification and partial characterization of the nonribosomal peptide synthetase gene responsible for cereulide production in emetic Bacillus cereus. | Biological sciences | Siegfried Scherer, Maria Andersson, Monika Ehling-Schulz, Natasa Vukov, Anja Schulz, Ranad Shaheen, Erwin Martlbauer |
| Identification and phenotypic characterization of Sphingomonas wittichii strain RW1 by peptide mass fingerprinting using matrix-assisted laser desorption ionization-time of flight mass spectrometry. | Biological sciences | Rolf U. Halden, David R. Colquhoun, Eric S. Wisniewski |
| Identification, cloning, and characterization of a Lactococcus lactis branched-chain alpha-keto acid decarboxylase involved in flavor formation. | Biological sciences | Gerrit Smit, Bart A. Smit, Johan E.T. van Hylckama Vlieg, Wim J.M. Engels, Laura Meijer, Jan T.M. Wouters |
| Identification of 9,17-dioxo-1,2,3,4,10,19-hexanorandrostan-5-oic acid, 4-hydroxy-2-oxohexanoic acid, and 2-hydroxyhexa-2,4-dienoic acid and related enzymes involved in testosterone degradation in Comamonas testosteroni TA441. | Biological sciences | Toshiaki Kudo, Masae Horinouchi, Toshiaki Hayashi, Hiroyuki Koshino, Tomokazu Kurita |
| Identification of acyl-homoserine lactone signal molecules produced by Nitrosomonas europaea strain Schmidt. | Biological sciences | W.J. Hickey, E.O. Burton, H.W. Read, M.C. Pellitteri |
| Identification of a gene cluster for the formation of extracellular polysaccharide precursors in the chemolithoautotroph Acidithiobacillus ferrooxidans. | Biological sciences | Marlen Barreto, Eugenia Jedlicki, David S. Holmes |
| Identification of a new Borrelia species among small mammals in areas of northern Spain where Lyme disease is endemic. | Biological sciences | Horacio Gil, Marta Barral, Raquel Escudero, Ana L. Garcia-Perez, Pedro Anda |
| Identification of bacteria in biofilm and bulk water samples from a nonchlorinated model drinking water distribution system: Detection of a large nitrite-oxidizing population associated with Nitrospira spp. | Biological sciences | Soren Molin, Hans-Jorgen Albrechtsen, Erik Arvin, Adam C. Martiny |
| Identification of bacteria potentially responsible for oxic and anoxic sulfide oxidation in biofilters of a recirculating mariculture system. | Biological sciences | Jaap van Rijn, Andreas Schramm, Eddie Cytryn, Dror Minz, Armin Gieseke, Dirk de Beer |
| Identification of "Candidatus Thioturbo danicus," a microaerophilic bacterium that builds conspicuous veils on sulfidic sediments. | Biological sciences | Gerard Muyzer, Roland Thar, Michael Kuhl, Esengul Yildirim, Udo Van Dongen |
| Identification of cyanophage Ma-LBP and infection of the cyanobacterium Microcystis aeruginosa from an Australian subtropical lake by the virus. | Biological sciences | Stephen Tucker, Peter Pollard |
| Identification of DNA sequences specific for Vibrio vulnificus biotype 2 strains by suppression subtractive hybridization. | Biological sciences | Eva Sanjuan, Carmen Amaro, Chug-Te Lee, Lein-I Hor |
| Identification of endopeptidase genes from the genomic sequence of Lactobacillus helveticus CNRZ32 and the role of these genes in hydrolysis of model bitter peptides. | Biological sciences | James L. Steele, Jeffery R. Broadbent, Joanne E. Hughes, Vidya R. Sridhar, Dennis L. Welker |
| Identification of extracellular N-acylhomoserine lactone acylase from a streptomyces sp. and its application to quorum quenching. | Biological sciences | Sun-Yang Park, Bon-Tag Koo, Do-Young Yum, Jung-Kee Lee, Hye-Ok Kang, Hak-Sun Jang |
| Identification of genes differentially expressed in extraradical mycelium and ectomycorrhizal roots during Paxillus involutus-Betula pendula ectomycorrhizal symbiosis. | Biological sciences | Michel Chalot, Melanie Morel, Christophe Jacob, Annegret Kohler, Tomas Johansson, Francis Martin, Annick Brun |
| Identification of genes induced in Listeria monocytogenes during growth and attachment to cut cabbage, using differential display. | Biological sciences | Jeffrey D. Palumbo, Aya Kaneko, Kimanh D. Nguyen, Lisa Gorski |
| Identification of genes involved in cytochrome c biogenesis in Shewanella oneidensis, using a modified mariner transposon. | Biological sciences | R. Bouhenni, A. Gehrke, D. Saffarini |
| Identification of novel Salmonella enterica serovar Typhimurium DT104-specific prophage and nonprophage chromosomal sequences among serovar Typhimurium isolates by genomic subtractive hybridization. | Biological sciences | Tjakko Abee, Armand P.H.M. Hermans, Marcel H. Zweitering, Henk J.M. Aarts |
| Identification of pilus-like structures and genes in microcystis aeruginosa PCC7806. | Biological sciences | Brett A. Neilan, Kenlee Nakasugi |
| Identification of Shewanella Baltica as the most important H2S-producing species during iced storage of Danish marine fish. | Biological sciences | Birte Fonnesbech Vogel, Lone Gram, Kasthuri Venkateswaran, Masataka Satomi |
| Identification of unique type II polyketide synthase genes in soil. | Biological sciences | Jerome J. Kukor, Gerben J. Zylstra, Boris Wawrik, Lee Kerkhof |
| Identifying components of the NF-(sub K)B pathway in the beneficial Euprymna scolopes-vibrio fischeri light organ symbiosis. | Biological sciences | Margaret J. McFall-Ngai, Thomas L. Casavant, Michael S. Goodson, Mila Kojadinovic, Joshua V. Troll, Todd E. Scheetz, M. Bento Soares |
| Identifying host sources of fecal pollution: Diversity of Escherichia coli in confined dairy and swine production system. | Biological sciences | Andrew Scott, Edward Topp, Zexun Lu, David Lapen, Angela Dang |
| Immobilization of Escherichia coli cells by use of the antimicrobial peptide cecropin P1. | Biological sciences | Kalvin Gregory, Charlene M. Mello |
| Impact of bacterial NO3(super -) transport on sediment biogeochemistry. | Biological sciences | Mikio Sayama, Nils Risgaard-Petersen, Lars Peter Nielson, Henrick Fossing, Peter Bondo Christensen |
| Impact of Bt corn on rhizosoheric and soil eubacterial communities and on beneficial mycorrhizal symbiosis in experimental microcosms. | Biological sciences | A. Turrini, A. Benedetti, M. Castaldini, B. Pietrangeli, M.P. Nuti, F. Santomassimo, N. Miclaus, C. Sbrana, S. Landi, M. Giovannetti, A. Fabiani, M. Marchionni, S. Mocali |
| Impact of phages on two-species bacterial communities. | Biological sciences | J.J. Bull, W.R. Harcombe |
| Impact of plant species and site on rhizosphere-associated fungi antagonistic to Verticillium dahliae kleb. | Biological sciences | Kornelia Smalla, Rodrigo Costa, Gabriele Berg, Christin Zachow, Jana Lottmann, Monika Gotz |
| Impact of the microscale distribution of a Pseudomonas strain introduced into soil on potential contacts in indigenous bacteria. | Biological sciences | Franck Bertolla, Arnaud Echesne, Celine Pallud, Genevieve L. Grundmann |
| Importance of 3-hydroxy fatty acid composition of lipopeptides for biosurfactant activity. | Biological sciences | Michael J. McInerney, Kathleen E. Duncan, Noha H. Youssef |
| Importance of organosulfur utilization for survival of Pseudomonas putida in soil and rhizosphere. | Biological sciences | Andrew Smith, Pascal Mirleau, Roy Wogelius, Michael A. Kertesz |
| Improved assessment of denitrifying, N2-fixing, and total-community bacteria by terminal restriction fragment length polymorphism analysis using multiple restriction enzymes. | Biological sciences | Hermann Bothe, Christopher Rosch |
| Improved secretory production of recombinant proteins by random mutagenesis of hlyB, an alpha-hemolysin transporter from Escherichia coli. | Biological sciences | Yosuhiro Sugamata, Toshikazu Shiba |
| Improved system for construction and analysis of single-copy beta-galactosidase operon fusions in Yersinia enterocolitica. | Biological sciences | Michelle E. Maxson, Andrew J. Darwin |
| Improvement of catalytic properties of Escherichia coli penicillin G acylase immobilized on glyoxyl agarose by addition of a six-amino-acid tag. | Biological sciences | Francesca Scaramozzino, Ilona Estruch, Paola Rossolillo, Marco Terreni, Alessandra M. Albertini |
| Improvement of galactose uptake in Saccharomyces cerevisiae through overexpression of phosphoglucomutase: Example of transcript analysis as a tool in inverse metabolic engineering. | Biological sciences | Jens Nielsen, Lisbeth Olsson, Steen Knudsen, Christoffer Bro, Birgitte Regenberg |
| Improvement of NaNO2-oxidizing activity in Nitrobacter vulgaris by coentrapment in polyacrylamide containing polydimethylsiloxane copolymer and DEAE-Sephadex. | Biological sciences | Songping Zhang, Olof Norrlow, Estera Szwajcer Dey |
| Improvement of the fatty acid composition of an oil-producing filamentous fungus, Mortierella alpina IS-4, through RNA interference with delta12-desaturase gene expression. | Biological sciences | Sakayu Shimizu, Toshihiko Ashikari, Seiki Takeno, Eiji Sakuradani, Akiko Tomi, Misa Inohara-Ochiai, Hiorshi Kawashima |
| Improvement of xylose uptake and ethanol production in recombinant Saccharomyces cerevisiae through an inverse metabolic engineering approach. | Biological sciences | Gregory Stephanopoulos, Hal Alper, Yong-Su Jin, Yea-Tyng Yang |
| Improving the activity and stability of GL-7-ACA acylase CA130 by site-directed mutagenesis. | Biological sciences | Wei Zhang, Sheng Yang, Yuan Liu, Huabao Zheng, Weihong Jiang |
| Inactivation of Bacillus Endospores in envelopes by electron beam irradiation. | Biological sciences | Shannon L. Helfinstein, Carlos Vargas-Aburto, Roberto M. Uribe, Christopher J. Woolverton |
| Inactivation of Bacillus Endospores in envelopes by electron beam irradiation. | Biological sciences | Shannon L. Helfinstein, Carlos Vargas-Aburto, Roberto M. Uribe, Christopher J. Woolverton |
| Inactivation of enteric adenovirus and feline calicivirus by chlorine dioxide. | Biological sciences | Charles P. Gerba, Jeanette A. Thurston-Enriquez, Charles N. Haas, Joseph Jacangelo |
| Inactivation of Escherichia coli O157:H7 in simulated human gastric fluid. | Biological sciences | Mark L. Tamplin |
| Inactivation of spores of Bacillus anthracis sterne, Bacillus cereus and Bacillus thuringiensis subsp. israelensis by chlorination. | Biological sciences | E.W. Rics, N.J. Adcock, M. Sivaganesan, L.J. Rose |
| Incidence and diversity of potentially highly heat-resistant spores isolated at dairy farms. | Biological sciences | Paul De Vos, Lieve Herman, Marc Heyndrickx, Patsy Scheldeman, Annelies Pil |
| Incorporation of glucose under anoxic conditions by bacterioplankton from coastal North Sea surface waters. | Biological sciences | Jakob Pernthaler, Cecilia Alonso |
| Increase in xylanase production by Streptomyces lividans through simultaneous use of the sec- and tat- dependent protein export systems. | Biological sciences | Rolf Morosoli, Celine Gauthier, Haiming Li |
| Increasing prevalence of Campylobacter jejuni in feedlot cattle through the feeding period. | Biological sciences | Jeffrey T. LeJeune, Thomas E. Besser, Dale D. Hancock, Daniel H. Rice, Wonki Bae, Janice Berg, R.P. Stilborn, Katherine Kaya |
| Indications for acquisition of reductive dehalogenase genes through horizontal gene transfer by Dehalococcoides ethenogenes strain 195. | Biological sciences | Christof Holliger, Julien Maillard, Christophe Regeard, Christine Dufraigne, Patrick Deschavanne |
| Inducible gene expression in Lactobacillus reuteri LTH5531 during type II sourdough fermentation. | Biological sciences | Jens Walter, Christian Hertel, Fabio Dal Bello, Stefan Roos, Hans Jonsson |
| Induction of oxidative stress by high hydrostatic pressure in Escherichia coli. | Biological sciences | Chris W. Michiels, Philipp De Spiegeleer, Abram Aertsen, Kristof Vanoirbeek, Maria Lavilla |
| Induction of Shiga toxin-converting prophage in Escherichia coli by high hydrostatic pressure. | Biological sciences | Chris W. Michiels, Abram Aertsen, David Faster |
| Infectious swine hepatitis E virus is present in pig manure storage facilities on United States farms, but evidence of water contamination is lacking. | Biological sciences | C. Kasorndorkbua, T. Opriessnig, F.F. Huang, D.K. Guenette, P.J. Thomas, X.-J Meng, P.G. Halbur |
| Influence of dietary zinc oxide and copper sulfate on the gastrointestinal ecosystem in newly weaned piglets. | Biological sciences | Ole Hojberg, Bent Borg Jensen, Nuria Canibe, Hanne Damgaard Poulsen, Mette Skou Hedemann |
| Influence of environmental conditions on methanogenic compositions in anerobic biogas reactors. | Biological sciences | Dimitar Karakashev, Damien J. Batstone, Irini Angelidaki |
| Influence of fermentation medium composition on physicochemical surface properties of Lactobacillus acidophilus. | Biological sciences | Job Ubbink, Prisca Schar-Zammaretti, Marie-Lise Dillmann, Nicola D'Amico, Michael Affolter |
| Influence of glutamate on growth, sporulation, and spore properties of Bacillus cereus ATCC 14579 in defined medium. | Biological sciences | Tjakko Abee, Willem M. de Vos, Ynte P. de Vries, Luc M. Hornstra, Ratna D. Atmadja |
| Influence of growth phase on adhesion kinetics of Escherichia coli D21g. | Biological sciences | Menachem Elimelech, Sharon Walker, Jane E. Hill, Jeremy A. Redman |
| Influence of inorganic nitrogen management regime on the diversity of nitrite-oxidizing bacteria in agricultural grassland soils. | Biological sciences | James I. Prosser, Thomas E. Freitag, Lisa Chang, Christopher D. Clegg |
| Influence of starvation on potential ammonia-oxidizing activity and amoA mRNA levels of Nitrosospira briensis. | Biological sciences | Ingo Schmidt, Aaron M. Saunders, Annette Bollmann, Mette H. Nicolaisen |
| Influence of stress on individual lag time distributions of Listeria monocytogenes. | Biological sciences | L. Guillier, P. Pardon, J. C. Augustin |
| Influence of top-down and bottom-up manipulations on the R-BT065 subcluster of beta-proteobacteria, an abundant group in bacterioplankton of a freshwater reservoir. | Biological sciences | Karel Simek, Karel Hornak, Jiri Nedoma, Michal Masin, Michael Schauer, Jan Jezbera, Joseph M. Gasol |
| Inhibition of Clostridium perfringens by a novel strain of Bacillus subtilis isolated from the gastrointestinal tracts of healthy chickens. | Biological sciences | Alex Yeow-Lim Teo, Hai-Meng Tan |
| Inhibition of efflux transporter-mediated fungicide resistance in Pyrenophora tritici-repentis by a derivative of 4'-hydroxyflavone and enhancement of fungicide activity. | Biological sciences | Sven Reimann, Holger B. Deising |
| Inhibition of Helicobacter pylori and associated urease by oregano and cranberry phytochemical synergies. | Biological sciences | R.G. Labbe, Y.T. Lin, Y.I. Kwon, K. Shetty |
| Inhibition of NO3(super -) and NO2(super -) reduction by microbial Fe(III) reduction: Evidence of a reaction between NO2(super -) and cell surface-bound Fe(super 2+). | Biological sciences | Flynn W. Picardal, Aaron J. Coby |
| Insertional inactivation of determinants for Mg(super 2+) and Co(super 2+) transport as a tool for screening recombinant Lactococcus species clones. | Biological sciences | Olivia McAuliffe, Colin Hill, R. Paul Ross, Gerald F. Fitzgerald, Susan Mills, Aidan Coffrey |
| Insights into Actinobacillus succinogenes fermentative metabolism in a chemically defined growth medium. | Biological sciences | Claire Vieille, J. Gregory Zeikus, James B. McKinlay |
| Insights into the biosynthesis of the benzoquinone ansamycins geldanamycin and herbimycin obtained by gene sequencing and disruption. | Biological sciences | C. Richard Hutchinson, Andreas Rascher, Zhihao Hu, Ralph Reid, Greg O. Buchanan |
| In silico reconstruction of the metabolic pathways of Lactobacillus plantarum: Comparing predictions of nutrients requirements with those from growth experiments. | Biological sciences | Eddy J. Smid, Roland J. Siezen, Arno Wegkamp, Bas Teusink, Frank H.J. van Enckevort, Christof Francke, Anne Wiersma |
| Integrated recombinant protein expression and purification platform based on Ralstonia eutropha. | Biological sciences | Tillman U. Gerngross, Gavin C. Barnard, Jesse D. McCool, David W. Wood |
| Integration of signals through Crc and PtsN in catabolite repression of Pseudomonas putida TOL plasmid pWW0.(catabolite repression control) | Biological sciences | Isabel Aranda-Olmedo |
| Interaction of Pasteurella multocida with free-living amoebae. | Biological sciences | Matthew J. Hundt, Cramel G. Ruffolo |
| Interactions between oral bacteria: Inhibition of Streptococcus mutans bacteriocin production by Streptococcus gordonii. | Biological sciences | Howard K. Kuramitsu, Bing-Yan Wang |
| Interactions between the Fe(III)-reducing bacterium Geobacter sulfurreducens and arsenate, and capture of the metalloid by biogenic Fe(II). | Biological sciences | J.R. Lloyd, J.M. Charnock, F.S. Islam, R.L. Pederick, A.G. Gault, L.K. Adams, D.A. Polya |
| Intervening sequence acquired by lateral gene transfer in Tropheryma whipplei results in 23S rRNA fragmentation. | Biological sciences | Didier Raoult, Nicolas Crapoulet, Stlvianne Robineau, Patricia Renesto |
| Intestinal bacterial communities that produce active estrogen-like compounds enterodiol and enterolactone in humans. | Biological sciences | Michael Blaut, Joel Dore, Carl-Alfred Alpert, Thomas Clavel, Gemma Henderson, Catherine Philippe, Lionel Rigottier-Gois |
| Intra- and interspecific comparisons of bacterial diversity and community structure support coevolution of gut micorbiota and termite host. | Biological sciences | Toshiaki Kudo, Yuchi Hongoh, Pinsurang Deevong, Tetsushi Inoue, Napavarn Noparatnaraporn, Shigeharu Moriya, Charunee Vongkaluang, Savitr Trakulnaleamsai, Moriya Ohkuma |
| Intracellular butyryl phosphate and acetyl phosphate concentrations in Clostridium acetobutylicum and their implications for solvent formation. | Biological sciences | George N. Bennett, Eleftherios T. Papoutsakis, Christopher A. Tomas, Yinsuo Zhao, Fredrick B. Rudolph |
| Intracellular pH distribution in Saccharomyces cerevisiae cell populations, analyzed by flow cytometry. | Biological sciences | Diethard Mattanovich, Danilo Porro, Michael Sauer, Paola Branduardi, Minoska Valli, Nicole Borth |
| Intracellular screen to identify metagenomic clones that induce or inhibit a quorum-sensing biosensor. | Biological sciences | Jo Handelsman, Patrick D. Schloss, Lynn L. Williamson, Bradley R. Borlee, Changhui Guan, Heather K. Allen |
| Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness.(distance-based operational taxonomic units) | Biological sciences | Jo Handelsman, Patrick D. Schloss |
| Investigation of an acetate-fed denitrifying microbial community by stable isotope probing, full-cycle rRNA analysis, and fluorescent in situ hybridization-microautoradiography. | Biological sciences | Jurg Keller, Maneesha P. Ginige, Linda L. Blackhall |
| Investigation of Oscillatoria spongeliae-dominated bacterial communities in four dictyoceratid sponges. | Biological sciences | D. John Faulkner, Margo G. Haygood, Christian P. Ridley |
| Investigation of specific substitution in virulence genes characterizing phenotypic groups of low-virulence field strains of Listeria monocytogenes. | Biological sciences | C. Jacquet, S.M. Roche, S. Temoin, P. Velge, P. Gracieux, O. Grepinet, E. Milohanic, A. Kerouanton, I. Albert, I. Virologeux-Payant, P. Cossart |
| Investigation of the microbial ecology of intertidal hot springs by using diversity analysis of 16S rRNA and chitinase genes. | Biological sciences | Gudmundur O. Hreggvidsson, Viggo T. Marteinsson, Jakob K. Kristjansson, Cedric F.V. Hobel |
| Investigation of two distinct flavone synthases for plant-specific flavone biosynthesis in Saccharomyces cerevisiae. | Biological sciences | Yajun Yan, Mattheos A.G. Koffas, Effendi Leonard, Kok Hong Lim |
| In vitro determination of prebiotic properties of oligosaccharides derived from an orange juice manufacturing by-product stream. | Biological sciences | G.R. Gibson, K. Manderson, M. Pinart, K.M. Tuohy, W.E. Grace, A.T. Hotchkiss, W. Widmer, M.P. Yadhav, R.A. Rastall |
| In vitro reconstruction of an NADPH-dependent superoxide reduction pathway from Pyrococcus furiosus.(Nicotinamide Adenosine Dinucleotide Phosphate) | Biological sciences | Amy M. Grunden, Francis E. Jenney Jr., Kesen Ma, Mikyoung Ji, Michael V. Weinberg |
| In vitro study of lipid biosynthesis in an anaerobically methane-oxidizing microbial mat. | Biological sciences | Walter Michaelis, Martin Blumenberg, Richard Seifert, Katja Nauhaus, Thomas Pape |
| In vivo monitoring of obligate biotrophic pathogen growth by kinetic PCR. | Biological sciences | Richard C. Hamelin, Brian Boyle, Armand Seguin |
| Involvement of a branched-chain aminotransferase in production of volatile sulfur compounds in Yarrowia lipolytica. | Biological sciences | Pascal Bonnarme, Daniela Cernat Bondar, Jean-Marie Beckerich |
| Involvement of bacterial quorum-sensing signals in spoilage of bean sprouts. | Biological sciences | Lone Gram, Michael Givskov, Jens Bo Andersen, Henrik Christensen, Lars Ravn Flodgaard, Maria Rasch, Kristian Fog Nielsen |
| Iron uptake mechanisms in the fish pathogen Tenacibaculum maritimum. | Biological sciences | Jesus L. Romalde, Ruben Avendano-Herrera, Alica E. Toranzo, Manuel L. Lemos, Beatriz Magarinos |
| Isolation and characterization of a genetically tractable photoautotrophic Fe(II)-oxidizing bacterium, Rhodopseudomonas palustris strain TIE-1. | Biological sciences | Andreas Kappler, Dianne K. Newman, Yongqin Jiao, Laura R. Croal |
| Isolation and characterization of a native composite transposon, Tn14751, carrying 17.4 kilobases of Corynebacterium glutamicum chromosomal DNA. | Biological sciences | Masayuki Inui, Hideaki Yukawa, Nobuaki Suzuki, Yota Tsuge, Alain A. Vertes |
| Isolation and characterization of a novel antialgal allelochemical from Phragmites communis. | Biological sciences | Feng-Min Li, Hong-Ying Hu |
| Isolation and characterization of a novel single-stranded RNA virus infectious to a marine fungoid protist, Schizochytrium sp. (Thraustochytriaceae, Labyrinthulea). | Biological sciences | Daiske Honda, Keizo Nagasaki, Yoshitake Takao, Kazuyuki Mise, Tetsuro Okuno |
| Isolation and characterization of Aspergillus oryzae vacuolar protein sorting mutants. | Biological sciences | Katsuhiko Kitamoto, Mamoru Ohneda, Manabu Arioka |
| Isolation and characterization of novel giant Stenotrophomonas maltophilia phage phiSMA5. | Biological sciences | Yi-Hsiung Tseng, Hsiao-Chuan Chang, Chiy-Rong Chen, Juey-Wen Lin, Gwan-Han Shen, Kai-Ming Chang, Shu-Fen Weng |
| Isolation and characterization of o-xylene oxygenase genes from Rhodococcus opacus TKN14. | Biological sciences | Norihiko Misawa, Kazutoshi Shindo, Takahiro Maruyama, Masaharu Ishikura, Hironori Taki, Hiroaki Kasai, Miyuki Haga, Yukie Inomata |
| Isolation and characterization of temperate bacteriophages of Clostridium difficile. | Biological sciences | Barbara J. Chang, Shan Goh, Thomas V. Riley |
| Isolation and partial characterization of anatagonistic peptides produced by Paenibacillus sp. strain B2 isolated from the Sorghum mycorrhizophere. | Biological sciences | S. Selim, J. Negrel, C. Govaerts, D. van Tuinen, S. Gianinazzi |
| Isolation of a hop-sensitive variant of Lactobacillus lindneri and identification of genetic markers for beer spoilage ability of lactic acid bacteria. | Biological sciences | Hiroshi Yamashita, Koji Suzuki, Kazumaru Iijima, Kazutaka Ozaki |
| Isolation of auxotrophic mutants of diploid industrial yeast strains after UV mutagenesis. | Biological sciences | Shiniji Hashimoto, Mayumi Ogura, Kazuo Aritomi, Hisashi Hoshida, Yoshinori Nishizawa, Rinji Akada |
| Isolation of llama antibody fragments for prevention of dandruff by phage display in shampoo. | Biological sciences | Gert Vriend, Christian Cambillau, Edward Dolk, Marcel van der Vaart, David Lutje Hulsik, Hans de Haard, Silvia Spinelli, Leon Frenken, Theo Verrips |
| Isolation of multidrug-resistant Stenotrophomonas maltophilia from cultured yellowtail (Seriola quinqueradiata) from a marine fish farm. | Biological sciences | Toshimichi Maeda, Tsuneo Shiba, Manabu Furushita, Michio Ohta, Akira Okamoto |
| Isolation of Mycobacterium avium subsp. paratuberculosis from free-ranging birds and mammals on livestock premises. | Biological sciences | John R. Fischer, Joseph L. Corn, Elizabeth J.B. Manning, Srinand Sreevatsan |
| Isolation of Vibrio alginolyticus and Vibrio splendidus from aquacultured carpet shell clam (Ruditapes decussatus) larvae associated with mass mortalities. | Biological sciences | J. Gomez-Leon, L. Villamil, M.L. Lemos, B. Novoa, A. Figueras |
| Isolation, sequence analysis, and comparison of two plasmids (28 and 29 kilobases) from the biomining bacterium Leptospirillum ferrooxidans ATCC 49879. | Biological sciences | Douglas E. Rawlings, Nicolette J. Coram, Leonard J. van Zyl |
| Isotope labeling and microautoradiography of active heterotrophic bacteria on the basis of assimilation of (super 14)CO2. | Biological sciences | Peter Roslev, Martin Hesselsoe, Jeppe Lund Nielsen, Per Halkaer Nielsen |
| Key role of cysteine residues in catalysis and subcellular localization of sulfur oxygenase-reductase of Acidianus tengchogenisis. | Biological sciences | Qunxin She, Zhi-Wei Chen, Cheng-Ying Jiang, Shuang-Jiang Liu, Pei-Jin Zhou |
| Kinetic studies and biochemical pathway analysis of anaerobic poly-(R)-3-hydroxybutyric acid synthesis in Escherichia coli. | Biological sciences | Ross Carlson, Aaron Wlaschin, Friedrich Srienc |
| Kluyveromyces lactis LAC4 promoter variants that lack function in bacteria but retain full function in K. lactis. | Biological sciences | Paul A. Colussi, Christopher H. Taron |
| Lactobacillus casei DN-114 001 inhibits the ability of adherent-invasive escherichia coli isolated from Crohn's disease patients to adhere to and to invade intestinal epithelial cells. | Biological sciences | Isabelle Ingrassia, Antony Lepingard, Arlette Darfeuille-Michaud |
| Lactobacillus oligofermentans sp. nov., associated with spoilage of modified-atmosphere-packaged poultry products. | Biological sciences | Peter Vandamme, Tom Coenye, Joanna Koort, Anna Murros, Susanna Eerola, Antti Sukura, Johanna Bjorkroth |
| Lactobacillus paracasei subsp. paracasei 8700:2 degrades insulin-type fructans exhibiting differen degrees of polymerization. | Biological sciences | Luc De Vuyst, Lefteris Makras, Gerald Van Acker |
| Lactococcus lactis SpOx spontaneous mutants: A family of oxidative-stress-resistant dairy strains. | Biological sciences | Gerard Corthier, Philippe Langella, Alexandra Gruss, Tatiana Rochat, Jean-Jacques Gratadoux, Berard Coqueran, Nader-Macias, Maria-Elena |
| Large-scale engineering of the Corynebacterium glutamicum genome. | Biological sciences | Masayuki Inui, Hideaki Yukawa, Nobuaki Suzuki, Satoshi Okayama, Hiroshi Nonaka, Yota Tsuge |
| Legionella confirmation using real-time PCR and SYT09 is an alternative to current methodology. | Biological sciences | Christopher P. Saint, Paul T. Monis, Steven Giglio |
| Legionella contamination in hot water of Italian hotels. | Biological sciences | Maria Teresa Montagna, Serena Stampi, Giovanna Stancanelli, Vincenzo Romano-Spica, Maria Triassi, Isabella Marchesi, Bargellini Annalisa, Danielo Tato, Christian Napoli, Franca Zanetti, Erica Leoni, Matteo Moro, Stefania Scaltriti, Gabriella Ribera D'Alcala, Rosalba Santarpia, Stefania Boccia |
| Legionella species diversity in an acidic biofilm community in Yellowstone National Park. | Biological sciences | Kathy B. Sheehan, Michael J. Ferris, Joan M. Henson |
| Lignin-derived compounds as efficient laccase mediators for decolorization of different types of recalcitrant dyes. | Biological sciences | Angel T. Martinez, Maria Jesus Martinez, Susana Camarero, David Ibarra |
| Links between plant and rhizoplane bacterial communities in grassland soils, characterized using molecular techniques. | Biological sciences | James I. Prosser, Brajesh K. Singh, Naoise Numan, Timothy J. Daniell, Artemis Papert, James W. McNicol |
| Lipid biomarkers and carbon isotope signatures of a microbial (Beggiatoa) mat associated with gas hydrates in the Gulf of Mexico. | Biological sciences | Richard D. Pancost, Roger Sassen, Timothy W. Lyons, Chuanlun L. Zhang, Robin L. Brigmon, Zhiyong Huang, James Cantu |
| Listeria monocytogenes PerR mutants display a small-colony phenotype, increased sensitivity to hydrogen peroxide, and significantly reduced murine virulence. | Biological sciences | Colin Hill, Cormac G.M. Gahan, Rosemarie Rea |
| Longitudinal study of microbial diversity and seasonality in the Mexico City metropolitan area water supply system. | Biological sciences | Marisa Mazari-Hiriart, Yolanda Lopez-Vidal, Sergio Ponce-de-Leon, Juan Jose Calva, Gonzalo Castillo-Rojas, Fransisco Rojo-Callejas |
| Long-term survival of pathogenic and sanitation indicator bacteria in experimental biowaste composts. | Biological sciences | Sabine Houot, Jean Guzzo, Melanie Lemunier, Cedric Francou, Sandrine Rousseaux, Philippe Dantigny, Pascal Piveteau |
| Low intraspecific diversity in a Polynucleobacter subcluster population numerically dominating bacterioplankton of a freshwater pond. | Biological sciences | Martin W. Hahn, Matthias Pockl, Qinglong L. Wu |
| Low-temperature growth of shewanella oneidenis MR-1. | Biological sciences | Kenneth H. Nealson, Randa Abbound, Radu Popa, Virginia Souza-Egipsy, Carol S. Giometti, Sandra Tollaksen, Jennifer J. Mosher, Robert H. Findlay |
| L-Selective amidase with extremely broad substrate specificity from Ochrobactrum anthropi NCIMB 40321. | Biological sciences | Marcel G. Wubbolts, Theo Sonke, Sandra Ernste, Renate F. Tandler, Bernard Kaptein, Wilco P.H. Peeters, Frisco B.J. van Assema, Hans E. Schoemaker |
| LuxS-based signaling affects Streptococcus mutans biofilm formation. | Biological sciences | Akihiro Yoshida, Toshihiro Ansai, Tadamichi Takehara, Howard K. Kuramitsu |
| Maltotriose utilization by industrial Saccharomyces strains: Characterization of a new member of the alpha-glucoside transporter family. | Biological sciences | Isabel Spencer-Martins, Madalena Salema-Oom, Vera Valadao Pinto, Paula Goncalves |
| Manipulating corynebacteria, from individual genes to chromosomes. | Biological sciences | Masayuki Inui, Hideaki Yukawa, Alain A. Vertes |
| Mapping of neutralizing epitopes on Renibacterium salmoninarum p57 by use of transposon mutagenesis and synthetic peptides. | Biological sciences | Gregory D. Wiens, Jennifer Owen |
| Mass outbreak of food poisoning disease caused by small amounts of staphylococcal enterotoxins A and H. | Biological sciences | Tetsuya IKeda, Naoto Tamate, Keiji Yamaguchi, Sou-ichi Makino |
| Maturation by LctT is required for biosynthesis of full-length lantibiotic lacticin 481. | Biological sciences | Dominique Haras, Patricia Uguen, Thomas Hindre, Sandrine Didelot, Christel Marty, Jean-Paul Le Pennec, Karine Vallee-Rehel, Alain Dufour |
| Membrane adsorption with direct cell culture combined with reverse transcription-PCR as fast method for identifying enteroviruses from sewage. | Biological sciences | D. Papaventsis, N. Siafakas, P. Markoulatos, C. Kourtis, E. Chatzichristou, C. Economou, S. Levidiotou |
| Membrane damage and microbial inactivation by chlorine in the absence and presence of a chlorine-demanding substrate. | Biological sciences | I. Alvarez, R. Virto P. Manas, S. Condon, J. Raso |
| Mercury adaptation among bacteria from a deep-sea hydrothermal vent. | Biological sciences | Richard A. Lutz, Jonna Coombs, Tamar Barkay, Costantino Vetriani, Yein S. Chew, Susan M. Miller, Jane Yagi |
| Metabolically improved exopolysaccharide production by Streptococcus thermophilus and its influence on the rheological properties of fermented milk. | Biological sciences | Peter Radstrom, Malin Svensson, Elisabet Waak, Ulla Svensson |
| Metabolically independent and accurately adjustable Aspergillus sp. expression system. | Biological sciences | Robert Pachlinger, Rudolf Mitterbauer, Gerhard Adam, Joseph Strauss |
| Metabolic and transcriptomic adaptation of Lactococcus lactis subsp. lactic biovar diacetylactis in response to autoacidification and temperature downshift in skim milk. | Biological sciences | Sandy Raynaud, Remi Perrin, Muriel Cocaign-Bousquet, Pascal Loubiere |
| Metabolic engineering of Corynebacterium glutamicum for L-serine production. | Biological sciences | Hermann Sahm, Lothar Eggeling, Petra Peters-Wendisch, Michael Stolz, Helga Etterich, Nicole Kennerknecht |
| Metabolic engineering of Escherichia coli for enhanced production of succinic acid, based on genome comparison and in silico gene knockout simulation. | Biological sciences | Sang Jun Lee, Sang Yup Lee, Dong-Yup Lee, Tae Yong Kim, Byung Hun Kim, Jinwon Lee |
| Metabolic engineering of the Phenylpropanoid pathway in Saccharomyces cerevisiae. | Biological sciences | Hanxiao Jiang, Karl V. Wood, John A. Morgan |
| Metabolic engineering of the purine pathway for riboflavin production in Ashbya gossypii. | Biological sciences | Alberto Jimenez, Maria A. Santos, Markus Pompejus, Jose L. Revuelta |
| Metabolic network analysis of Streptomyces tenebrarius, a Streptomyces species with an active Entner-Doudoroff pathway. | Biological sciences | Anna Eliasson, Jens Nielsen, Irina Borodina, Charlotte Scholler |
| Metabolism of bismuth subsalicylate and intracellular accumulation of bismuth by Fusarium sp. strain BI. | Biological sciences | Lawrence P. Wackett, Anthony G. Dodge |
| Metabolism of carbaryl via 1,2-dihydroxynaphthalene by soil isolates pseudomonas sp. strains C4, C5, and C6. | Biological sciences | Vandana P. Swetha, Prashant S. Phale |
| Metabolism of the aliphatic nitramine 4-nitro-2,4-diazabutanal by Methylobacterium sp. strain JS178. | Biological sciences | Jalal Hawari, Sandra Trott, Jim Spain, Diane Fournier |
| Metagenomic analysis reveals diverse polyketide synthase gene clusters in microorganisms associated with the marine sponge Discodermia dissoluta. | Biological sciences | Edward F. DeLong, C. Richard Hutchinson, Andreas Schirmer, Christopher D. Reeves, Rishali Gadkari, Fadia Ibrahim |
| Metagenomics analysis of the microbial community at zodletone spring (Oklahoma): Insights into the genome of a member of the novel candidate division OD1. | Biological sciences | Mostafa S. Elshahed, Fares Z. Najar, Bruce A. Roe, Lee R. Krumholz, Mandy Aycock, Chunmei Qu |
| Methane-oxidizing bacteria in a California upland grassland soil: Diversity and response to simulated global change. | Biological sciences | Hans-Peter Horz, Brendan J.M. Bohannan, Sharon Avrahami, Virginia Rich |
| Methanonogen diversity evidenced by molecular characterization of methyl coenzyme M reductase A (mcrA) genes in hydrothermal sediments of the Guaymas Basin. | Biological sciences | Andreas Teske, Mitchell L. Sogin, Ashita Dhillon, Karen G. Lloyd, Mark Lever, Daniel B. Albert |
| Methods to increase fidelity of repetitive extragenic palindromic PCR fingerprint-based bacterial source tracking efforts. | Biological sciences | Wail M. Hassan, Shiao Y. Wang, Rudolph D. Ellender |
| Methylotrophic metabolism is advantageous for Methylobacterium extorquens during colonization of Medicago truncatula under competitive conditions. | Biological sciences | Claudia Knief, Abdoulaye Sy, Antonius C.J. Timmers, Julia A. Vorholt |
| Microarray analysis of a two-component regulatory system involved in acid resistance and proteolytic activity in Lactobacillus acidophilus. | Biological sciences | Todd R. Klaenhammer, Sonja Lick, Eric Altermann, M. Andrea Azcarate-Peril, Olivia McAulliffe, W. Michael Russell |
| Microarray-based detection and typing of the rhizobium nodulation gene nodC: Potential of DNA arrays to diagnose biological functions of interest. | Biological sciences | Cyril Bontemps, Catherine Boivin-Masson, Geoffroy Golfier, Carine Gris-Liebe, Sebastian Carrere, Luc Talini |
| Microbial desulfurization of gasoline in a Mycobacterium goodii X7B immobilized-cell system. | Biological sciences | Ping Xu, Fuli Li, Jinhui Feng, Ling Meng, Yuan Zheng, Lailong Luo, Cuiqing Ma |
| Microbial diversity in coastal subsurface sediments: A cultivation approach using various electron acceptors and substrate gradients. | Biological sciences | Henrik Sass, Heribert Cypionka, Beate Kopke, Reinhard Wilms, Bert Engelen |
| Microbial diversity in ultra-high-pressure rocks and fluids from the Chinese continental scientific drilling project in China. | Biological sciences | Zhang Gengxin, Hailiang Dong, Zhiqin Xu, Donggao Zhao, Chuanlun Zhang |
| Microbiological and geochemical heterogeneity in an in situ uranium bioremediation field site. | Biological sciences | Derek R. Lovley, Robert T. Anderson, David C. White, Aaron D. Peacock, Philip E. Long, Helen A. Vrionis, Irene Ortiz-Bernad, Charles T. Resch, Richard Dayvault, Kathleen R. O'Neill |
| Microbiological study of lactic acid fermentation of caper berries by molecular and culture-dependent methods. | Biological sciences | Antonio Galvez, Hikmate Abriouel, Nabil Ben Omar, Rosario Lucas Lopez, Magdalena Martinez Canamero, Ruben Perez Pulido |
| Microcolony cultivation on a soil substrate membrane system selects for previously uncultured soil bacteria. | Biological sciences | Belinda C. Ferrari, Svend J. Binnerup, Michael Gillings |
| Microplate subtractive hybridization to enrich for bacteroidales genetic markers for fecal source identification. | Biological sciences | Katharine G. Field, Linda K. Dick, Michael T. Simonich |
| Mineralization of the cyclic nitramine explosive hexahydro-1,3,5-trinitro-1,3,5-triazine by Gordonia and Williamsia spp. | Biological sciences | Fiona H. Crocker, Herbert L. Fredrickson, Karen T. Thompson |
| Mobility of protozoa through narrow channels. | Biological sciences | David S. Kosson, Wei Wang, Leslie M. Shor, Eugene J. LeBoeuf, John P. Wikswo |
| Modeling bacteriocin resistance and inactivation of Listeria innocua LMG 13568 by Lactobacillus sakei CTC 494 under sausage fermentation conditions. | Biological sciences | Luc De Vuyst, Frederic Leroy, Kristoff Lievens |
| Modeling surface growth of Escherichia coli on agar plates. | Biological sciences | Hiroshi Fujikawa, Satoshi Morozumi |
| Modification of surface properties of biomaterials influences the ability of Candida albicans to form biofilms. | Biological sciences | Jian Li, Pranab K. Mukherjee, Jyotsna Chandra, Mahmoud A. Ghannoum, Jasmine D. Patel, Guangyin Zhou, Thomas S. McCormick, James M. Anderson |
| Molecular analysis of human, porcine, and poultry Enterococcus faecium isolates and their erm(B) genes. | Biological sciences | F. Haesebrouck, E. De Leener, A. Martel, Graef, E.M. De, Top, J., P. Butaye, A. Decostere, R. Willems |
| Molecular analysis of the O-antigen gene cluster of Escherichia coli O86:B7 and characterization of the chain length determination gene (wzz). | Biological sciences | Hongjie Guo, Wen Yi, Jun Shao, Yuquan Lu, Wenpeng Zhang, Jing Song, Peng George Wang |
| Molecular and conformational basis of a specific and high-affinity interaction between albA and albicidin phytotoxin. | Biological sciences | Qi Li, Li-Xing Weng, Lian-Hui Wang, Jin-Ling Xu, Ji-En Wu, Lian-Hui Zhang |
| Molecular and phenotypic analyses reveal association of diverse Colletotrichum acutatum groups and a low level of C. gloeosporioides with olive anthracnose. | Biological sciences | Pedro Talhinhas, S. Sreenivasaprasad, Joao Neves-Martins, Helena Oliveira |
| Molecular assays for targeting human and bovine enteric viruses in coastal waters and their application for library-independent source tracking. | Biological sciences | Dale W. Griffin, Erin K. Lipp, Theng-Theng Fong |
| Molecular characterization of Clostridium perfringens isolates from humans with sporadic diarrhea: Evidence for transcriptional regulation of the beta2-toxin-encoding gene. | Biological sciences | Mahfuzur R. Sarker, Richard W. Titball, Deepa Raju, Ben Harrison, Helen S. Garmony, Moira M. Brett |
| Molecular characterization of Clostridium tetani strains by pulsed-field gel electrophoresis and colony PCR. | Biological sciences | Lucile Plourde-Owobi, Delphine Seguin, Marie-Anne Baudin, Catherine Moste, Bachra Rokbi |
| Molecular characterization of Korean Bacillus anthracis isolates by amplified fragment length polymorphism analysis and multilocus variable-number tandem repeat analysis. | Biological sciences | Chunsun Ryu, Kyunghee Lee, Han-Jun Hawng, Cheon-Kwon Yoo, Won-Keun Seong, Hee-Bok Oh |
| Molecular characterization of plasmid pBM300 from Bacillus megaterium QM B1551. | Biological sciences | Muthusamy Kunnimalaiyaan, Patricia S. Vary |
| Molecular characterization of resistance-nodulation-division transporters from solvent- and drug-resistant bacteria in petroleum-contaminated soil. | Biological sciences | Kazuya Watanabe, Yumiko Kodama, Norika Meguro, Maria-Trinidad Gallegos |
| Molecular characterization of the nonphotosynthetic partner bacterium in the consortium "Chlorochromatium aggregatum". | Biological sciences | Jorg Overmann, Birgit E.M. Kanzler, Kristina R. Pfannes, Kajetan Vogl |
| Molecular detection of Mycobacterium bovis and Mycobacterium bovis BCG (Pasteur) in soil. | Biological sciences | Elizabeth M.H. Wellington, Jamie S. Young, Eamonn Gormley |
| Molecular diversity and characterization of tetracycline-resistant Staphylococcus aureus isolates from a poultry processing plant. | Biological sciences | Alexander von Holy, Geert Huys, Jean Swings, Klaas D'Haene, Johan Van Eldere |
| Molecular epidemiology of antimicrobial-resistant commensal Escherichia coli strains in a cohort of newborn calves. | Biological sciences | Esther J. Turner, Deborah V. Hoyle, J. Chris Low, George J. Gunn, Sebastian G.B. Amyes, Catherine M. Yates, Margor E. Chase-Topping, Mark E. Woolhouse, Sarah E. Davies |
| Molecular forensic profiling of Cryptosporidium species and genotypes in raw water. | Biological sciences | Norman F. Neumann, Peter Wallis, Judith L. Isaac-Renton, Norma J. Ruecker, Niravanh Bounsombath, Corinne S.L. Ong |
| Molecular identification and analysis of Borrelia burgdorferi sensu lato in lizards in the Southeastern United States. | Biological sciences | Kerry Clark, Amanda Hendricks, David Burge |
| Molecular serotyping of Escherichia coli O26:H11. | Biological sciences | James E. Keen, James L. Bono, Lisa M. Durso |
| Monitoring of antibiotic-induced alterations in the human intestinal microflora and detection of probiotic strains by use of terminal restriction fragment length polymorphism. | Biological sciences | Janet K. Jansson, Cecilia Jernberg, Asa Sullivan, Charlotta Edlund |
| Monitoring stress-related genes during the process of biomass propagation of Saccharomyces cerevisiae strains used for wine making. | Biological sciences | Jose M. Bruno-Barcena, Roberto Perez-Torrado, Emilia Matallana |
| Monte Carlo simulation of pathogen behavior during the sprout production process. | Biological sciences | Rebecca Montville, Donald Schaffner |
| Movement and fixation of intestinal microbiota after administration of human feces to germfree mice. | Biological sciences | Ryoko Kibe, Mitsuo Sakamoto, Hiroshi Yokota, Hiroki Ishikawa, Yuji Aiba, Yasuhiro Koga, Yoshimi Benno |
| Multilocus sequence type system for the plant pathogen Xylella fastidiosa and relative contributions of recombination and point mutation to clonal diversity. | Biological sciences | Mark Scally, Erin L. Schuenzel, Richard Stouthamer, Leonard Nunney |
| Multilocus simple sequence repeat markers for differentiating strains and evaluating genetic diversity of Xylella fastidiosa. | Biological sciences | Hong Lin, Edwin L. Civerolo, Rong Hu, Samuel Barros, Marta Francis, M. Andrew Walker |
| Multiple reductive-dehalogenase-homologous genes are simultaneously transcribed during dechlorination by Dehalococcoides-containing cultures. | Biological sciences | Elizabeth A. Edwards, Frank E. Loffler, Rosa Krajmalnik-Brown, Alison S. Waller |
| Mutation of a LysR-type regulator of antifungal activity results in a growth advantage in stationary phase phenotype in Pseudomonas aureofaciens PA147-2. | Biological sciences | Stephen R. Giddens, H. Khris Mahanty, Mark W. Silby |
| Mutation of glutamic acid 103 of toluene o-xylene monooygenase as a means to control the catabolic efficiency of a recombinant upper pathway for degradation of methylated aromatic compounds. | Biological sciences | Eugenio Notomista, Alberto Di Donato, Valeria Cafaro, Paola Capasso |
| Mutations to toluene-4-monooxygenase that alter regiospecificity of indole oxidation and lead to production of novel indigoid pigments. | Biological sciences | Kevin McClay, Robert J. Steffan, Corinne Boss, Ivan Keresztes |
| Mycobacterial ecology of the Rio Grande. | Biological sciences | Maria E. Alvarez, Christopher S. Bland, Jamie M. Ireland, Eduardo Lozano, Todd P. Primm |
| Mycobacterium avium subspecies paratuberculosis cultured from locally and commercially pasteurized cow's milk in the Czech Republic. | Biological sciences | Ivo Pavlik, Wuhib Y. Ayele, Petra Svastova, Petr Roubal, Milan Bartos |
| Mycobacterium avium subsp. paratuberculosis in the catchment area and water of the river Taff in South Wales, United Kingdom, and its potential relationship to clustering of Crohn's disease cases in the city of Cardiff. | Biological sciences | R.W. Pickup, G. Rhodes, S. Arnott, K. Sidi-Boumedine, J. Hermon-Taylor, T.J. Bull, M. Hurley, A. Weightman |
| Mycosubtilin overproduction by Bacillus subtilis BBG100 enhances the organism's antagonistic and biocontrol activities. | Biological sciences | Valerie Leclere, Frederique Gancel, Max Bechet, Akram Adam, Jean-Sebastien Guez, Bernard Wathelet, Marc Ongena, Philippe Thonart, Marlene Chollet-Imbert, Philippe Jacques |
| Natural dissemination of Bacillus anthracis spores in Northern Canada. | Biological sciences | D.C. Dragon, D.E. Bader, N. Woollen, J. Mitchell |
| Naturally occurring DNA transfer system associated with membrane vesicles in cellulolytic Ruminococcus spp. of ruminal origin. | Biological sciences | Robert J. Forster, Athol V. Klieve, Diane Ouwerkerk, Melvin T. Yokoyama, Peter A. Bain, Erin L. Mawhinney |
| Nearly identical bacteriophage structural gene sequences are widely distributed in both marine and freshwater environments. | Biological sciences | Curtis A. Suttle, Cindy M. Short |
| Nested PCR-denaturing gradient gel electrophoresis approach to determine the diversity of sulfate-reducing bacteria in complex microbial communities. | Biological sciences | Gerard Muyzer, J. Gijs Kuenen, Shabir A. Dar |
| New chitosan-degrading strains that produce chitosanases similar to ChoA of Mitsuaria chitosanitabida. | Biological sciences | ChoongSoo Yun, Daiki Amakat, Yasuhiro Matsuo, Hideyuki Matsuda, Makoto Kawamukai |
| New findings on evolution of metal homeostasis genes: Evidence from comparative genome analysis of bacteria and arhcaea. | Biological sciences | T. Barkay, J.M. Coombs |
| New gammaproteobacteria associated with blood-feeding leeches and a broad phylogenetic analysis of leech endosymbionts. | Biological sciences | Susan L. Perkins, Rebecca B. Budinoff, Mark E. Siddall |
| New multiple-deletion method for the Corynebacterium glutamicum genome, using a mutant lox sequence. | Biological sciences | Masayuki Inui, Hideaki Yukawa, Nobuaki Suzuki, Hiroshi Nonaka, Yota Tsuge |
| New resistance mechanism in Helicoverpa armigera threatens transgenic crops expressing Bacillus thuringiensis Cry1Ac toxin. | Biological sciences | Robin V. Gunning, Ho T. Dang, Fred C. Kemp, Ian C. Nicholson, Graham D. Moores |
| New strategy for identification of novel cry-type genes from Bacillus thuringiensis strains. | Biological sciences | Corina M. Beron, Leonardo Curatti, Graciela L. Salerno |
| New thermophilic and thermostable esterase with sequence similarity to the hormone-sensitive lipase family, cloned from a metagenomic library. | Biological sciences | Jong-Won Oh, Jin-Kyu Rhee, Dae-Gyun Ahn, Yeon-Gu Kim |
| New tool for metabolic pathway engineering in Escherichia coli: One-step method to modulate expression of chromosomal genes. | Biological sciences | Philippe Soucaille, Isabelle Meynial-Salles, Marguerite A. Cervin |
| Nickel and cobalt resistance engineered in Escherichia coli by overexpression of serine acetyltransferase from nickel hyperaccumulator plant Thlaspi goesingense. | Biological sciences | David E. Salt, John L. Freeman, Michael W. Persans, Ken Nieman |
| Nine-year study of the occurrence of culturable viruses in source water for two drinking water treatment plants and the influent and effluent of a wastewater treatment plant in Milwaukee, Wisconsin (August 1194 through July 2003). | Biological sciences | Gerald Sedmak, David Bina, Jeffrey R. MacDonald, Lon Couillard |
| Nitrate and phosphate affect cultivability of cyanobacteria from environments with low nutrient levels. | Biological sciences | Anneliese Ernst, Manfred Deicher, Peter M.J. Herman, Ute I.A. Wollenzien |
| Nodulation of Lupinus albus by strains of Ochrobactrum lupini sp. nov. | Biological sciences | Anne Willems, Encarna Velazquez, Martha E. Trujillo, Pedro F. Mateos, Eustoquio Martinez-Molina, Adriana Abril, Ana-Maria Planchuelo, Dolores Ludena, Raul Rivas |
| Nonbioluminescent strains of Photobacterium phosphoreum produce the cell-to-cell communication signal N-(3-hydroxyoctanoyl)homoserine lactone. | Biological sciences | M. Givskov, J.B. Andersen, K.F. Nielsen, L.R. Flodgaard, P. Dalgaard, L. Gram |
| Non-Frankia actinomycetes isolated from surface-sterilized roots of Casuarina equisetifolia fix nitrogen. | Biological sciences | Philippe Normand, Jesus Caballero-Mellado, Maria Valdes, Nestor-Octavio Perez, Paulina Estrada-de los Santos, Juan Jose Pena-Cabriales, Ann M. Hirsch |
| Nonpathogenic strains of Colletotrichum lindemuthianum trigger progressive bean defense responses during appressorium-mediated penetration. | Biological sciences | Thierry Langin, Claire Veneault-Fourrey, Richard Lauge |
| Novel 4-chlorophenol degradation gene cluster and degradation route via hydroxyquinol in Arthrobacter chlorophenolicus A6. | Biological sciences | Janet K. Jansson, Karolina Nordin, Maria Unell |
| Novel activator of mannose-specific phosphotransferase system permease expression in Listeria innocua, identified by screening for pediocin AcH resistance. | Biological sciences | Bibek Ray, Junfeng Xue, Ian Hunter, Adam Peters, Tori Steinmetz, Kurt W. Miller |
| Novel approach to quantitative detection of specific rRNA in a microbial community, using catalytic DNA. | Biological sciences | Takahiro Kanagawa, Hikaru Suenaga, Rui Liu, Yuko Shiramasa |
| Novel AroA with high tolerance to glyphosate, encoded by a gene of Pseudomonas putida 4G-1 isolated from an extremely polluted environment in China. | Biological sciences | Jing Zhang, David N. Dowling, Yi-Cheng Sun, Yan-Cheng Chen, Zhe-Xian Tian, Feng-Mei Li, Xin-Yue Wang, Zhen-Long Xiao, Min Lin, Niamh Gilmartin, Yi-Ping Wang |
| Novel carotenoid oxidase involved in biosynthesis of 4,4'- diapolycopene dialdehyde. | Biological sciences | J. Martin Odom, Luan Tao, Andreas Schenzle, Qiong Cheng |
| Novel chemoautotrophic endosymbiosis between a member of the epsilonproteobacteria and the hydrothermal-vent gastropod Alviniconcha aff. hessleri (Gastropoda: Provannidae) from the Indian Ocean. | Biological sciences | Kenneth H. Nealson, Ken Takai, Koki Horikoshi, Yohey Suzuki, Masae Suzuki, Masae Sasaki, Yuichi Nogi, Tetsuya Miwa |
| Novel DNA sequences from natural strains of the nitrogen-fixing symbiotic bacterium Sinorhizobium meliloti. | Biological sciences | Hong Guo, Sheng Sun, Turlough M. Finan, Jianping Xu |
| Novel keratinase from Bacillus subtilis S14 exhibiting remarkable dehairing capabilities. | Biological sciences | Alexandre J. Macedo, Walter O. Beys da Silva, Renata Gava, David Driemeier, Joao Antonio Pegas Henriques, Carlos Termignoni |
| Novel lectin-like bacteriocins of biocontrol strain Pseudomonas fluorescens Pf-5. | Biological sciences | Rene De Mot, Annabel H.A. Parret, Koen Temmerman |
| Novel major bacterial candidate division within a municipal anaerobic sludge digester. | Biological sciences | Abdelghani Sghir, Jean Weissenbach, Rakia Chouari, Denis Le Paslier, Patrick Daegelen, Catherine Dauga |
| Novel method for detection of butanolides in Streptomyces coelicolor culture broth, using a His-tagged receptor (ScbR) and mass spectrometry. | Biological sciences | Yung-Hun Yang, Hwang-Soo Joo, Kwangwon Lee, Kwang-Kyung Liou, Byung-Gee Kim, Hei-Chan Lee, Jae-Kyung Sohng |
| Novel primers reveal wider diversity among marine aerobic anoxygenic phototrophs. | Biological sciences | Marcelino T. Suzuki, Oded Beja, Natalya Yutin |
| Novel putative galactose operon involving lacto-N-biose phosphorylase in Bifidobacterium longum. | Biological sciences | Motomitsu Kitaoka, Jiesheng Tian, Mamoru Nishimoto |
| Novel vip3-related protein from Bacillus thuringiensis. | Biological sciences | Roger Frutos, Cecile Rang, Patricia Gil, Nathalie Neisner, Jeroen Van Rie |
| Nutrient effects on biocontrol of Penicillium roqueforti by pichia anomala J121 during airtight storage of wheat. | Biological sciences | Johan Schnurer, Volkmar Passoth, Ulrika Adel Druvefors |
| Occurrence and relatedness of vancomycin-resistant enterococcci in animals, humans, and the environment in different European regions. | Biological sciences | Inger Kuhn, Aina Inversen, Maria Finn, Christina Greko, Lars G. Burman, Blanc, Xavier Vilanova, Albert Mareno, Taylor, Jonathan Caplin, Lucas Dominguez, Inmaculada A. Herrero, Miguel A Moreno |
| Occurrence of drug-resistant bacteria in two European eel farms. | Biological sciences | Consuelo Esteve, Elena Alcaide, Maria-Dolores Blasco |
| Occurrence of Listeria spp. in effluents of French urban wastewater treatment plants. | Biological sciences | Pierre Caumette, Claudine Quentin, Delphine Paillard, Veronique Dubois, Fany Nathier, Rodolphe Thiebaut, Emilie Hoogland |
| Occurrence of Mycobacterium avium subsp. paratuberculosis in untreated water in Northern Ireland. | Biological sciences | Irene R. Grant, Michael T. Rowe, Lynne Whan, Hywel J. Ball |
| On-probe sample pretreatment for direct analysis of lipids in gram-positive bacterial cells by matrix-assisted laser desorption ionization mass spectrometry. | Biological sciences | Yasuyuki Ishida, Kuniyuki Kitagawa, Akihito Nakayama, Hajime Ohtani |
| On-site DNA extraction and real-time PCR for detection of Phytophthora ramorum in the field.(polymerase chain reaction) | Biological sciences | N. Boonham, J.A. Tomlinson, K.J.D. Hughes, R.L. Griffin, I. Barker |
| Opposite enantioselectivities of two phenotypically and genotypically similar strains of Pseudomonas frederiksbergensis in bacterial whole-cell sulfoxidation. | Biological sciences | Jean-Marie Meyer, Waldemar Adam, Chantu R. Saha-Moller, Frank Heckel, Marcus Taupp, Peter Schreier |
| Optical brighteners do not influence covert baculovirus infection of Spodoptera frugiperda. | Biological sciences | Trevor Williams, Miguel Lopez-Ferber, Primitivo Caballero, Ana-Mabel Martinez |
| Optically transparent porous medium for nondestructive studies of microbial biofilm architecture and transport dynamics. | Biological sciences | Andrew P. Leis, Sven Schlicher, Hilmar Franke, Martin Strathmann |
| Optimization of cholesterol removal by probiotics in the presence of prebiotics by using a response surface method. | Biological sciences | M.T. Liong, N.P. Shah |
| Outer membrane c-type cytochromes required for Fe(III) and Mn(IV) oxide reduction in Geobacter sulfurreducens. | Biological sciences | M.V. Coppi, D.R. Lovley, T. Mehta, S.E. Childers |
| Overexpression of an anti-CD3 immunotoxin increases expression and secretion of molecular chaperone BiP/Kar2p by Pichia pastoris. | Biological sciences | Yuan Yi Liu, Jung Hee Woo, David M. Neville Jr. |
| Overproduction of heterologous mannitol 1-phosphatase: A key factor for engineering mannitol production by Lactococcus lactis. | Biological sciences | Jeroen Hugenholtz, H. Wouter Wisselink, Marcel H.N. Hoefnagel, Willem M. de Vos, Astrid E. Mars, Antoine P.H.A. Moers |
| Overview of the marine Roseobacter lineage. | Biological sciences | Jose M. Gonzalez, Mary Ann Moran, Alison Buchan |
| Paenibacillus polymyxa invades plant roots and forms biofilms. | Biological sciences | Salme Timmusk, Nina Grantcharova, E. Gerhart H. Wagner |
| Pathways for methanogenesis and diversity of methanogenic archaea in three boreal peatland ecosystems. | Biological sciences | H. Fritze, P.E. Galand, R. Conrad, K. Yrjala |
| Patterns of antimicrobial resistance observed in Escherichia coli isolates obtained from domestic- and wild-animal fecal samples, human septage, and surface water. | Biological sciences | Yvette Johnson, Raida S. Sayah, John B. Kaneene, RoseAnn Miller |
| Patterns of cryptosporidium oocyst shedding by eastern grey kangaroos inhibiting an Australian watershed. | Biological sciences | Duncan A. Veal, Michelle Power, Nicholas C. Sangster, Martin B. Slade |
| PCR-induced sequence artifacts and bias: Insights from comparison of two 16S rRNA clone libraries constructed from the same sample. | Biological sciences | Martin F. Polz, Silvia G. Acinas, Vanja Klepac-Ceraj, Ramahi Sarma-Rupavtarm |
| Pelagic-benthic coupling and diagenesis of nucleic acids in a deep-sea continental margin and an open-slope system of the eastern Mediterranean. | Biological sciences | Roberto Danovaro, Cinzia Corinaldesi, Antonio Dell'Anno, Spyros Stavrakakis, Vasilis Lykousis |
| Performance of media for recovering stressed cells of Enterobacter sakazakii as determined using spiral plating and ecometric techniques. | Biological sciences | L.R. Beuchat, J.B. Gurtler |
| Persistence and differential survival of fecal indicator bacteria in subtropical waters and sediments. | Biological sciences | Valerie J. Harwood, John E. Whitlock, Kimberley L. Anderson |
| Persistence of animal and human glycopeptide-resistant enterococci on two Norwegian poultry farms formerly exposed to avoparcin is associated with a widespread plasmid-mediated vanA element within a polyclonal Enterococcus faecium population. | Biological sciences | K. Nielsen, P.J. Johnsen, J.I. Osterhus, H. Sletvold, M. Sorum, H. Kruse, G.S. Simonsen, A. Sundsfjord |
| Persistence of enterococcus faecalis in aquatic environments via surface interactions with copepods. | Biological sciences | Caterina Signoretto, Pietro Canepari, Carla Pruzzo, Gloria Burlacchini |
| Phage tail-like (high-molecular-weight) bacteriocins of Budvicia aquatica and Pragia fontium (Enterobacteriaceae). | Biological sciences | Oldrich Benada, Jan Smarda |
| Phenotypic and genotypic selection of microbiota surviving under dental restorations. | Biological sciences | S.R. Brailsford, D. Beighton, J.S. Paddick, E.A.M. Kidd |
| Phenotypic screening of Escherichia coli K-12 Tn5 insertion libraries, using whole-genome oligonucleotide microarrays. | Biological sciences | Kelly M. Winterberg, John Luecke, Amanda S. Bruegl, William S. Reznikoff |
| pH-, Lactic acid-, and non-lactic acid dependent activities of probiotic lactobacilli against Salmonella enterica serovar typhimurium. | Biological sciences | Alain L. Servin, Domitille Fayol-Messaoudi, Cedric N. Berger, Marie-Helene Coconnier-Polter, Vanessa Lievin-Le Moal |
| Phosphate starvation-inducible gene ushA encodes a 5' nucleotidase required for growth of Corynebacterium glutamicum on media with nucleotides as the phosphorus source. | Biological sciences | Volker F. Wendisch, Doris Rittmann, Ulrike Sorger-Herrmann |
| Phospholipid furan fatty acids and ubiquinone-8: Lipid biomarkers that may protect Dehalococcoides strains from free radicals. | Biological sciences | David C. White, Aaron D. Peacock, David B. Hedrick, Frank E. Loffler, Stephen S. Koenigsberg, Roland Geyer, Youlboong Sung, Jianzhong He |
| Photodynamic inactivation of Bacillus spores, mediated by phenothiazinium dyes. | Biological sciences | Tatiana N. Demidova, Michael R. Hamblin |
| Photoheterotrophic metabolism of acrylamide by a newly isolated strain of Rhodopseudomonas palustris. | Biological sciences | Scott A. Ensign, David A. Wampler |
| Phylogenetic characterization of 16S rRNA gene clones from deep-groundwater microorganisms that pass through 0.2-micrometer-pore-size filters. | Biological sciences | Takeshi Naganuma, Tatsuo Miyoshi, Teruki Iwatsuki |
| Phylogenetic characterization of a polychlorinated-dioxin-dechlorinating microbial community by use of microcosm studies. | Biological sciences | Akira Hiraishi, Nobutaka Takahashi, Naoko Yoshida |
| Phylogenetic characterization of virulence and resistance phenotypes of Pseudomonas syringae. | Biological sciences | Sara F. Sarkar, Michael S.H. Hwang, Robyn L. Morgan, Pauline W. Wang, Daivd S. Guttman |
| Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis. | Biological sciences | J. Swings, P.L. Thompson, D. Gevers, C.C. Thompson, P. Dawyndt, C.B. Munn, S. Naser, B. Hoste |
| Phylogeography of sulfate-reducing bacteria among disturbed sediments, disclosed by analysis of the dissimilatory sulfite reductase genes (dsrAB). | Biological sciences | J.R. Perez-Jimenez, L.J. Kerkhof |
| Phylum- and class specific PCR primers for general microbial community analysis. | Biological sciences | Christopher B. Blackwood, Adam Oaks, Jeffery S. Buyer |
| Physiological characterization of the ARO10-dependent, broad-substrate-specificity 2-oxo acid decarboxylase activity of Saccharomyces cerevisiae. | Biological sciences | J. Richard Dickinson, Jack T. Pronk, Marijke A.H. Luttik, Zeynep Vuralhan, Marcos A. Morais, Siew Leng Tai, Viktor M. Boer, Dick Schipper, Marinka J.H. Almering, Peter Kotter, Jean-Marc Daran |
| Physiological conditions conductive to high cyanophycin content in biomass of Acinetobacter calcoaceticus strain ADP1. | Biological sciences | Alexander Steinbuchel, Rudolf Reichelt, Yasser Elbahloul, Martin Krehenbrink |
| Physiology and phylogeny of green sulfur bacteria forming a monospecific phototropic assemblage at a depth of 100 meters in the Black Sea. | Biological sciences | Jorg Overmann, Jens Glaeser, Ann K. Manske, Marcel M. Kuypers |
| Planktonic-cell yield of a pseudomonad biofilm. | Biological sciences | Sanja Saftic, Elanna Bester, Gideon Wolfaardt, Lydia Joubert, Kerstin Garny |
| Plasmid donor affects host range of promiscuous IncP-1beta plasmid pB10 in an activated-sludge microbial community. | Biological sciences | Larry J. Forney, Eva M. Top, Leen De Gelder, Frederick P.J. Vandecasteele, Celeste J. Brown |
| Plasmids for nicotine-dependent and -independent gene expression in Arthrobacter nicotinovorans and other Arthrobacter species. | Biological sciences | Cristinel Sandu, Calin-Bogdan Chiribau, Paula Sachelaru, Roderich Brandsch |
| Poly(A) polymerase modification and reverse transcriptase PCR amplification of environmental RNA. | Biological sciences | Lina M. Botero, Timothy R. McDermott, Mark Young, Daniel J. Hassett, Seth D'Imperio, Mark Burr |
| Polychlorinated biphenyl rhizoremediation by Pseudomonas fluorescens F113 derivatives, using a Sinorhizobium melitoti nod system to drive bhp gene expression. | Biological sciences | Marta Martin, Rafael Rivilla, Marta Villacieros, Thomas Macek, Ulrich Karlson, Clare Whelan, Luis Bolanos, David N. Dowling, Martina Mackova, Roke I. Oruezabel, Jesper Molgaard, Daniel Aguirre de Carcer, Maria Sachez-Contreras, Javier Lloret |
| Polyphenol oxidase activity expression in Ralstonia solanacearum. | Biological sciences | Diana Hernandez-Romero, Francisco Solano, Antonio Sanchez-Amat |
| Posttranslational modification of 6-phosphofructo-1-kinase in Aspergillus niger. | Biological sciences | Suzana Mesojednik, Matic Legisa |
| Potential for quantifying expression of the Geobacteraceae citrate synthase gene to assess the activity of Geobacteraceae in the subsurface and on current-harvesting electrodes. | Biological sciences | Kelly P. Nevin, Derek R. Lovley, Dawn E. Holmes, Helen A. Vrionis, Regina A. O'Neil, Joy E. Ward, Lorrie A. Adams, Trevor L. Woodard |
| Potential of the polyvalent anti-staphylococcus bacteriophage K for control of antibiotic-resistant staphylococci from hospitals. | Biological sciences | G.F. Fitzgerald, R.P. Ross, A. Coffey, S. O'Flaherty, W. Meaney, M.F. Elbreki |
| Potential role of diploscapter sp. strain LKC25, a baterivorous nematode from soil, as a vector of food-borne pathogenic bacteria to preharvest fruits and vegetables. | Biological sciences | Larry R. Beuchat, Gary L. Anderson, Daunte S. Gibbs, Lynn K. Carta, Phillip L. Williams |
| Potential uptake of Escherichia coli O157:H7 from organic manure into crisphead lettuce. | Biological sciences | Liv Marit Rorvik, Yngvild Wasteson, Gro S. Johannessen, Gunnar B. Bengtsson, Berit T. Heier, Sylvia Bredholt |
| Prediction of the adaptability of Pseudomonas putida DOT-T1E to a second phase of a solvent for economically sound two-phase biotransformations. | Biological sciences | Andreas Schmid, Grit Neumann, Hermann J. Heipieper, Nadja Kabelitz, Andreas Zehnsdorf, Anja Miltner, Holger Lippold, Daniel Meyer |
| Preparation, characterization, and optimization of an in vitro C30 carotenoid pathway. | Biological sciences | Claudia Schmidt-Dannert, Bosung Ku, Jae-Cheol Jeong, Benjamin N. Mijts, Jonathan S. Dordick |
| Presence and characterization of a mosaic genomic island which distinguishes sorbitol-fermenting enterohemorrhagic Escherichia coli O157:H- from E. coli O157:H7. | Biological sciences | Helge Karch, Martina Bielaszewska, Anne-Katharina Sonntag, Andreas Janka, Georg Becker, Ulrich Dobrindt |
| Presence and persistence of Legionella spp. in groundwater. | Biological sciences | Milton S. da Costa, Antonio Verissimo, Joana Costa, Igor Tiago |
| Presence of GadD1 glutamate decarboxylase in selected Listeria monocytogenes strains is associated with an ability to grow at low pH. | Biological sciences | Colin Hill, Paul D. Cotter, Sheila Ryan, Cormac G. M. Gahan |
| Presence of noroviruses and other enteric viruses in sewage and surface waters in the Netherlands. | Biological sciences | W.J. Lodder, A.M. de Roda Husman |
| Prevalence and antimicrobial resistance of thermophilic Campylobacter spp. from cattle farms in Washington State. | Biological sciences | Thomas E. Besser, Dale D. Hancock, Douglas R. Call, Wonki Bae, Katherine N. Kaya, Yong Ho Park |
| Prevalence and genetic diversity of Campylobacter spp. in environmental water samples from a 100-square-kilometer predominantly dairy farming area. | Biological sciences | J. Turner, C.A. Hart, R. Kemp, H.E. Clough, A.J.H. Leatherbarrow, N.J. Williams, E.J. Wright, N.P. French |
| Prevalence of Borrelia burgdorferi sensu lato genospecies in Ixodes ricinus ticks in Europe: A metaanalysis. | Biological sciences | Thomas Hartung, Carolin Rauter |
| Prevalence of pathogenic Yersinia enterocolitica strains in pigs in the United States. | Biological sciences | Irene V. Wesley, Saumya Bhaduri, Eric J. Bush |
| Prevalence of Salmonella spp. in oysters in the United States. | Biological sciences | Charles P. Gerba, Lynn A. Joens, Danielle A. Brands, Allison Inman E., C. John Mare, Stephen J. Billington, Linda A. Saif, Jay F. Levine |
| Probiotic bacteria may become dormant during storage. | Biological sciences | Arthur C. Ouwehand, Seppo J. Salminen, Miguel Gueimonde, Sampo J. Lahtinen, Johanna P. Reinikainen |
| Processive endoglucanase active in crystalline cellulose hydrolysis by the brown rot basidiomycete Gloeophyllum trabeum. | Biological sciences | Kenneth E. Hammel, Roni Cohen, Melissa R. Suzuki |
| Production and characterization of antibodies against each of the three subunits of the Bacillus cereus nonhemolytic enterotoxin complex. | Biological sciences | Per Einar Granum, Erwin Martlbauer, Richard Dietrich, Maximilian Moravek, Christine Burk |
| Production of autoinducer 2 in Salmonella enterica serovar Thompson contributes to its fitness in chickens but not on cilantro leaf surfaces. | Biological sciences | M.T Brandl, W.G. Miller, A.H. Bates, R.E. Mandrell |
| Production of engineered killer peptide in Nicotiana benthamiana by using a Potato virus X expression system. | Biological sciences | Marcello Donini, Eugenio Benvenuto, Chiara Lico, Luciano Polonelli, Selene Baschieri, Stefania Conti, Walter Magliani |
| Production of ethanol from starch by respiration-deficient recombinant Saccharomyces cerevisiae. | Biological sciences | Ebru Toksoy Oner, Stephan G. Oliver, Betul Kirdar |
| Production of novel rapamycin analogs by precursor-directed biosynthesis. | Biological sciences | Frank V. Ritacco, Edmund I. Graziani, Mia Y. Summers, Michael Greensterin, T. Mark Zabriskie, Guy T. Carter, Ker Yu, Valerie S. Bernan |
| Production of rhamnolipids by Pseudomonas chlororaphis, a nonpathogenic bacterium. | Biological sciences | Nereus W. Gunther IV, Alberto Nunez, William Fett, Daniel K.Y. Solaiman |
| Production of the potent antibacterial polyketide erythromycin C in Escherichia coli. | Biological sciences | Salvador Peiru, Hugo G. Menzella, Eduardo Rodriguez Veltze, John Carney, Hugo Gramajo |
| Proof that Burkholderia strains form effective symbioses with legumes: A study of novel Mimosa-nodulating strains from South America. | Biological sciences | J. Peter W. Young, Euan K. James, Alan R. Prescott, Wen-Ming Chen, Sergio M. de Faria, Rosangela Straliotto, Rosa M. Pitard, Jean L. Simoes-Araujo, Jui-Hsing Chou, Yi-Ju Chou, Edmundo Barrios, Geoffrey N. Elliott, Janet I. Sprent |
| Proof that Burkholderia strains form effective symbioses with legumes: A study of novel Mimosa-nodulating strains from South America. | Biological sciences | J. Peter W. Young, Euan K. James, Alan R. Prescott, Wen-Ming Chen, Sergio M. de Faria, Rosangela Straliotto, Rosa M. Pitard, Jean L. Simoes-Araujo, Jui-Hsing Chou, Yi-Ju Chou, Edmundo Barrios, Geoffrey N. Elliott, Janet I. Sprent |
| Prophage-like elements in bifidobacteria: Insights from genomics, transcription, integration, distribution, and phylogenetic analysis. | Biological sciences | Gerald F. Fitzgerald, Daniel J. O'Sullivan, Marco Ventura, Ralf Zink, Douwe van Sinderen, Carlos Canchaya, Ju-Hoon Lee, S. Leahy, J.A. Moreno-Munoz, M. O'Connell-Motherway, D. Higgins |
| Propionate oxidation by and methanol inhibition of anaerobic ammonium-oxidizing bacteria. | Biological sciences | Markus C. Schmid, Huub J.M. Op den Camp, Ingo Schmidt, Mike S.M. Jetten, Marc Strous, Didem Guven, Ana Dapena, Boran Kartal, Bart Mass, Katinka van de Pas-Schoonen, Seval Sozen, Ramon Mendez |
| Protamylasse, a residual compound of industrial starch production, provides a suitable medium for large-scale cyanophycin production. | Biological sciences | Alexander Steinbuchel, Yasser Elbahloul, Kay Frey, Johan Sanders |
| Proteins encoded by Sphingomonas elodea ATCC 31461 rmlA and ugpG genes, involved in gellan gum biosynthesis, exhibit both dTDP- and UDP-glucose pyrophosphorylase activities. | Biological sciences | Isabel Sa-Correia, Elisabete Silva, Ana Rita Marques, Arsenio Mendes Fialho, Ana Teresa Granja |
| Proteome analysis of Streptococcus thermophilus grown in milk reveals pyruvate formate-lyase as the major upregulated protein. | Biological sciences | Alexander Bolotin, Francoise Rul, Sylviane Derzelle, Michel-Yves Mistou |
| Proteomic profiling of recombinant Escherichia coli in high-cell-density fermentations for improved production of an antibody fragment biopharmaceutical. | Biological sciences | John C. Joly, Denise C. Krawitz, Ilana S. Aldor, William Forrest, Christina Chen, Kathleen M. Champion, Julie C. Nishihara |
| Proteomic signature of Lactococcus lactis NCDO763 cultivated in milk. | Biological sciences | Christophe Gitton, Mickael Meyrand, Juhui Wang, Christophe Caron, Alain Trubuil, Alain Guillot, Michel-Yves Mistou |
| Protozoan Acanthamoeba polyphaga as a potential reservoir for Campylobacter jejuni. | Biological sciences | Bjorn Olsen, Diana Axelsson-Olsson, Jonas Waldenstorm, Tina Broman, Martin Holmberg |
| Purification and cDNA cloning of NADPH-dependent aldoketoreductase, involved in asymmetric reduction of methyl 4-bromo-3-oxobutyrate, from penicillium citrinum IFO4631. | Biological sciences | Hiroyuki Asako, Ryuhei Wakita, Kenji Matsumara, Masatoshi Shimizu, Jun Sakai, Nobuya Itoh |
| Purification and characterization of a novel class IIa bacteriocin, piscicocin CS526, from Surimi-associated Carnobacterium piscicola CS526. | Biological sciences | Thomas J. Montville, Koji Yamazaki, Minako Suzuki, Yuji Kawai, Norio Inoue |
| Purification of cytochrome P450 and ferredoxin, involved in bisphenol A degradation, from Sphingomonas sp. strain AO1. | Biological sciences | Yoshinobu Matsumura, Tetsuaki Tsuchido, Miho Sasaki, Ayako Akahira, Ko-ichi Oshiman |
| Putative exposed aromatic and hydroxyl residues on the surface of the N-terminal domains of Chi1 from Aeromonas caviae CB101 are essential for chitin binding and hydrolysis. | Biological sciences | Qiang Li, Fengping Wang, Xiang Xiao, Ying Zhou |
| Putative polyketide synthase and laccase genes for biosynthesis of aurofusarin in Gibberella zeae. | Biological sciences | Jung-Eun Kim, Kap-Hoon Han, Jianming Jin, Hun Kim, Jin-Cheol Kim, Sung-Hwan Yun, Yin-Won Lee |
| Putative transposases conserved in Exiguobacterium isolates from ancient Siberian permafrost and from contemporary surface habitats. | Biological sciences | Sophia Kathariou, Tatiana A. Vishnivestkaya |
| Pyrimidine nucleoside salvage confers an advantage to Xenorhabdus nematophila in its host interactions. | Biological sciences | Samantha S. Orchard, Heidi Goodrich-Blair |
| Pyruvate fermentation by Oenococcus oeni and Leuconostoc mesenteroides and role of pyruvate dehydrogenase in anaerobic fermentation. | Biological sciences | Nicole Wagner, Quang Hon Tran, Hanno Richter, Paul M. Selzer, Gottfried Unden |
| Quantification of ammonia-oxidizing bacteria and factors controlling nitrification in salt marsh sediments. | Biological sciences | Joel E. Kostka, Sherry L. Dollhopf, Jung-Ho Hyun, April C. Smith, Harold J. Adams, Sean O'Brien |
| Quantification of Campylobacter spp. in chicken rinse samples by using flotation prior to real-time PCR. | Biological sciences | Peter Radstrom, Petra Wolffs, Borje Norling, Jeffrey Hoorfar, Mansel Griffiths |
| Quantification of enterococci and human adenoviruses in environmental samples by real-time PCR. | Biological sciences | Sunny Jiang, Jian-Wen He |
| Quantifying transmission of Campylobacter spp. among broilers. | Biological sciences | J.A.P. Heesterbeek, T.J.W.M. Van Gerwe, W.F. Jacobs-Reitsma, J. van den Broek, D. Klinkenberg, J.A. Stegeman |
| Quantitative analysis of group II intron expression and splicing in Lactococcus lactis. | Biological sciences | Larry L. McKay, Yuqing Chen, Joanna R. Klein, Gary M. Dunny |
| Quantitative detection of Listeria monocytogenes in biofilms by real-time PCR. | Biological sciences | Herve Prevost, Cinta Rachman, Xavier Dousset, Morgan Guilbaud, Pierre de Coppet, Fabrice Bourion |
| Quantitative molecular assay for fingerprinting microbial communities of wastewater and estrogen-degrading consortia. | Biological sciences | Gary Sayler, Rajiv Ahuja, Chang-Ping Yu, Kung-Hui Chu |
| Quantitative-PCR assessment of Cryptosporidium parvum cell culture infection. | Biological sciences | Mark W. LeChevallier, George D. Di Giovanni |
| Quantitative real-time PCR assays for detection of human adenoviruses and identification of Serotypes 40 and 41. | Biological sciences | Mark D. Sobsey, Dean D. Erdman, Theresa L. Cromeans, Narayanan Jothikumar, Vincent R. Hill, Xiaoyan Lu |
| Quantitative real-time PCR assays to identify and quantify fecal Bifidobacterium species in infants receiving a prebiotic infant formula. | Biological sciences | Monique Haarman, Jan Knol |
| Quantitative real-time reverse transcription-PCR analysis of deformed wing virus infection in the honeybee (Apis mellifera L.). | Biological sciences | Y.P. Chen, J.A. Higgins, M.F. Feldlaufer |
| Quorum-sensing mutations affect attachment and stability of Burkholderia cenocepacia biofilms. | Biological sciences | Douglas G. Storey, Kerry L. Tomlin, Rebecca J. Malott, Gordon Ramage, Pamela A. Sokol, H. Ceri |
| Rapid acyl-homoserine lactone quorum signal biodegradation in diverse soils. | Biological sciences | Ya-Juan Wang, Jared Renton Leadbetter |
| Rapid and quantitative detection of hepatitis A virus from green onion and strawberry rinses by use of real-time reverse transcription-PCR. | Biological sciences | P. Wolffs, M.W. Griffiths, X.C. Shan |
| Rapid and sensitive detection of noroviruses by using TaqMan-based one-step reverse transcription-PCR assays and application to naturally contaminated shellfish samples. | Biological sciences | Kathleen Henshilwood, David N. Lees, Jan Vinje, Narayanan Jothikumar, James A. Lowther, Vincent R. Hill |
| Rapid and simple quantification of bacterial cells by using a microfluidic device. | Biological sciences | Nobuyasu Yamaguchi, Masao Nasu, Chieko Sakamoto |
| Rapid biosensor of detection of antibiotic-selective growth of Escherichia coli. | Biological sciences | Karin Y. Gfeller, Natalia Nugaeva, Martin Hegner |
| Rapid detection of enteroviruses in small volumes of natural waters by real-time quantitative reverse transcriptase PCR. | Biological sciences | Rachel T. Noble, Jed A. Fuhrman, Xiaolin Liang |
| Rapid detection of subtype-selective nuclear hormone receptor binding with bacterial genetic selection. | Biological sciences | David W. Wood, Georgios Skretas |
| Rapid differentiation and in situ detection of 16 sourdough Lactobacillus species by multiplex PCR. | Biological sciences | Douwe van Sinderen, Aldo Corsetti, Luca Settanni, Jone Rossi |
| Rapid engineering of the geldanamycin biosynthesis pathway by red/ET recombination and gene complementation. | Biological sciences | C. Richard Hutchinson, Robert McDaniel, Leandro Vetcher, Zong-Qiang Tian, Andreas Rascher, W. Peter Revill, Zhihao Hu |
| Rapid identification and enumeration of Saccharomyces cerevisiae cells in wine by real-time PCR.(polymerase chain reaction) | Biological sciences | A. Querol, P. Martorell, M.T. Fernandez-Espinar |
| Rational design of a Corynebacterium glutamicum pantothenate production strain and its characterization by metabolic flux analysis and genome-wide transcriptional profiling. | Biological sciences | Alfred Puhler, Nic D. Lindley, Armel Guyonvarch, Andreas Tauch, Jorn Kalinowski, Andrea T. Huser, Miroslav Patek, Iris Brune, Christophe Chassagnole, Muriel Merkamm, Veronika Elisakova |
| Real-time nuclei acid sequence-based amplification assay for detection of hepatitis A virus. | Biological sciences | Wilfred Chen, Ashok Mulchandani, Marylynn V. Yates, Khaled H. Abd El Galil, Andre M. Salazar, M.A. El Sokkary, S.M. Kheira |
| Real-time PCR detection of Vibrio vulnificus in oysters: Comparison of oligonucleotide primers and probes targeting vvhA. | Biological sciences | Gitika Panicker, Asim K. Bej |
| Real-time PCR quantification of human adenoviruses in urban rivers indicates genome prevalence but low infectivity. | Biological sciences | Samuel Choi, Sunny C. Jiang |
| Real-time quantitative reverse transcription-PCR analysis of expression stability of Actinobacillus pleuropneumoniae housekeeping genes during in vivo growth under iron-depleted conditions. | Biological sciences | K. Klitgaard Nielsen, M. Boye |
| Reciprocal regulation of pyoluteorin production with membrane transporter gene expression in Pseudomonas fluorescens Pf-5. | Biological sciences | Joyce E. Loper, Marion Brodhagen, Ian Paulsen |
| Recognition of individual genes in diverse microorganisms by cycling primed in situ amplification. | Biological sciences | Nobuyasu Yamaguchi, Masao Nasu, Takehiko Kenzaka, Katsuji Tani, Shigeru Tamaki |
| Rectal carriage of enterohemorrhagic Escherichia coli O157 in slaughtered cattle. | Biological sciences | David L. Gally, Lesley Allison, J. Christopher Low, Irain J. Mckendrick, Caroline McKeehnie, David Fenlon, Stuart W. Naylor, Carol Currie, David G. E. Smith |
| Redox fluctuation structures microbial communities in a wet tropical soil. | Biological sciences | J. Pett-Ridge, M.K. Firestone |
| Redox interactions between Saccharomyces cerevisiae and Saccharomyces uvarum in mixed culture under enological conditions. | Biological sciences | Stephane Guezenec, Naoufel Cheraiti, Jean-Michel Salmon |
| Reduced genetic variation occurs among genes of the highly clonal plant pathogen Xanthomonas axonopodis pv. vesicatoria, including the effector gene avrBs2. | Biological sciences | Joy Bergelson, Gale Wichmann, David Ritchie, C.S. Kousik |
| Reduced proteolysis of secreted gelatin and Yps1-mediated alpha-factor leader processing in the Pichia pastoris kex2 disruptant. | Biological sciences | Marc W.T. Werten, Frits A. de Wolf |
| Reduction of uranium(VI) phosphate during growth of the thermophilic bacterium Thermoterrabacterium ferrireducens. | Biological sciences | T.V. Khijniak, E.A. Bonch-Osmolovskaya, A.I. Slobodkin, N.-K. Birkeland, V. Coker, N.N. Medvedeva-Lyalikova, J.C. Renshaw, J.R. Llyod, F.R. Livens |
| Regiospecificity of two multicomponent monooxygenases from Pseudomonas stutzeri OX1: Molecular basis for catabolic adaptation of this microorganism to methylated aromatic compounds. | Biological sciences | Eugenio Notomista, Alberto Di Donato, Valeria Cafaro, Paola Capasso |
| Regulation and characterization of two nitroreductase genes, nprA and nprB, of Rhodobacter capsulatus. | Biological sciences | Rafael Blasco, Francisco Castillo, Conrado Moreno-Vivian, M. Dolores Roldan, Eva Perez-Reinado |
| Regulation of resistance to copper in Xanthomonas axonopodis pv. vesicatoria. | Biological sciences | Donald A. Cooksey, Andreas E. Voloudakis, Therese M. Reignier |
| Rehydration of the lichen Ramalina lacera results in production of reactive oxygen species and nitric oxide and a decrease in antioxidants. | Biological sciences | Lior Weissman, Jacob Garty, Ayala Hochman |
| Relatedness of Listeria monocytogenes isolates recovered from selected ready-to-eat foods and listeriosis patients in the United States. | Biological sciences | John B. Luchansky, F. Morgan Wallace, Virginia N. Scott, Yuhuan Chen, Stefanie Evans Gilbreth, Jeff E. Call |
| Relationship between bacterioplankton richness, respiration, and production in the southern North Sea. | Biological sciences | Gerhard J. Herndl, Christian Winter, Thomas Reinthaler |
| Relationship between pH and medium dissolved solids in terms of growth and metabolism of lactobacilli and Saccharomyces cerevisiae during ethanol production. | Biological sciences | Neelakantam V. Narendranath, Ronan Power |
| Relationship of temporal and spatial variabilities of ammonia-oxidizing bacteria to nitrification rates in Monterey Bay, California. | Biological sciences | B.B. Ward, G.D. O'Mullan |
| Repeat-length-independent broad-spectrum shuffling, a novel method of generating a random chimera library in vivo. | Biological sciences | Masaki Iwabuchi, Koichi Mori, Takafumi Mukaihara, Yoshiko Uesugi, Tadashi Hatanaka |
| Representational difference analysis and real-time PCR for strain-specific quantification of Lactobacillus sobrius sp. nov. | Biological sciences | Willem M. de Vos, Hauke Smidt, Sergey R. Konstantinov |
| Resistance of marine bacterioneuston to solar radiation. | Biological sciences | Philippe Lebaron, Helene Agogue, Fabien Joux, Ingrid Obernosterer |
| Responses of Baltic Sea ice and open-water natural bacterial communities to salinity change. | Biological sciences | Kaarina Sivonen, Hermanni Kaartokallio, Maria Laamanen |
| Restoration of gibberellin production of Fusarium proliferatum by functional complementation of enzymatic blocks. | Biological sciences | S. Malonek, M.C. Rojas, P. Hedden, B. Tudzynski |
| Rhizobial 16S rRNA and dnaK genes: Mosaicism and the uncertain phylogenetic placement of Rhizobium galegae. | Biological sciences | B.D. Eardly, S.M. Nour, P. van Berkum, R.K. Selander |
| Rhizobium leguminosarum biovar viciae symbiotic hydrogenase activity and processing are limited by the level of nickel in agricultural soils. | Biological sciences | Juan Imperial, Tomas Ruiz-Argueso, Jose M. Palacios, Ana-Claudia Ureta |
| Rhodopseudomonas palustris regulons detected by cross-species analysis of alphaproteobacterial genomes. | Biological sciences | Charles Lawrence, Lee Ann McCue, Sean Conlan |
| Role for HtrA in stress induction and virulence potential in Listeria monocytogenes. | Biological sciences | Colin Hill, Roy D. Sleator, Cormac G.M. Gahan, Helena M. Stack, Megan Bowers |
| Role of cis-acting sites NorL, a TATA Box, and AflR1 in nor-1 transcriptional activation in Aspergillus parasiticus. | Biological sciences | John E. Linz, Michael J. Miller, Ludmila V. Roze, Frances Trail |
| Role of oxalic acid overexcretion in transformations of toxic metal minerals by Beauveria caledonica. | Biological sciences | S. Hillier, M. Fomina, J.M. Charnock, K. Melville, I.J. Alexander, G.M. Gadd |
| Role of spontaneous current oscillations during high-efficiency electrotransformation of thermophilic anaerobes. | Biological sciences | Lee R. Lynd, Michael V. Tyurin, Charles R. Sullivan |
| Role of the bga1-encoded extracellular beta-galactosidase of hypocrea jecorina in cellulase induction by lactose. | Biological sciences | Christian P. Kubicek, Bernhard Seiboth, Lukas Hartl, Noora Salovuori, Karin Lanthaler, Geoff D. Robson, Jari Vehmaanpera, Merja E. Penttila |
| Role of the regulatory gene rirA in the transcriptional response of Sinorhizobium meliloti to iron limitation. | Biological sciences | Alfred Puhler, Tzu-Chiao Chao, Jens Buhrmester, Nicole Hansmeier, Stefan Weidner |
| Role of the ssu and seu genes of corynebacterium glutamicum ATCC 13032 in utilization of sulfonates and sulfonate esters as sulfur sources. | Biological sciences | D.J. Koch, J. Kalinowski, C. Ruckert, D.A. Rey, A. Mix, A. Puhler |
| Roles of four chitinases (ChiA, CHiB, ChiC, and ChiD) in the chitin degradation system of marine bacterium Alteromonas sp. strain 0-7. | Biological sciences | Katsushiro Miyamoto, Hideyuki Orikoshi, Yoshihiko Inamori, Shigenari Nakayama, Chiaki Hanato, Masahide Yasuda, Hiroshi Tsuijibo |
| Roseobacter-like bacteria in Red and Mediterranean Sea aerobic anoxygenic photosyntheic populations. | Biological sciences | Ramon Massana, Oded Beja, Aia Oz, Gazalah Sabehi, Michal Koblizek |
| rRNA sequence-based scanning electron microscopic detection of bacteria. | Biological sciences | Nobuyasu Yamaguchi, Masao Nasu, Takehiko Kenzaka, Katsuji Tani, Ai Ishidoshiro |
| S434F in NrdE generates the thermosensitive phenotype of Corynebacterium ammoniagenes CH31 and enhances thermolability by increasing the surface hydrophobicity of the NrdE(Ts) protein. | Biological sciences | Georg Auling, Hesham M. Elhariry, Jochen Meens, Matthias Stehr |
| sacB-5-fluoroorotic acid-pyrE-based bidirectional selection for integration of unmarked alleles into the chromosome of Rhodobacter capsulatus. | Biological sciences | Fevzi Daldal, Takahiro Yano, Carsten Sanders, John Catalano |
| Salmonella enterica virulence genes are required for bacterial attachment to plant tissue. | Biological sciences | Jeri D. Barak, Amy O. Charkowski, Lisa Gorski, Pejman Naraghi-Arani |
| Sau-PCR, a novel amplification technique for genetic fingerprinting of microorganisms. | Biological sciences | Viviana Corich, Alessandro Mattiazzi, Elisa Soldati, Angela Carrara, Alessio Giacomini |
| Scarce evidence of yogurt lactic acid bacteria in human feces after daily yogurt consumption by healthy volunteers. | Biological sciences | Rosa del Campo, Daniel Bravo, Rafael Canton, Patricia Ruiz-Garbajosa, Raimundo Garcia-Albiach, Alejandra Montesi-Libois, Francisco-Javier Yuste, Victor Abraira, Fernando Baquero |
| Screening for Bacillus isolates in the broiler gastrointestinal tract. | Biological sciences | Martin J. Woodward, Teresa M. Barbosa, Claudia R. Serra, Roberto M. La Ragione, Adriano O. Henriques |
| Seasonal change in bacterial flora and biomass in mountain snow from the Tateyama Mountains, Japan, analyzed by 165 rRNA gene sequencing and real-time PCR. | Biological sciences | Shiro Kohshima, Takahiro Segawa, Koji Miyamoto, Kazunari Ushida, Kiyokazu Agata, Norihiro Okada |
| Seasonal response of stream biofilm communities to dissolved organic matter and nutrient enrichments. | Biological sciences | Laura G. Leff, Ola A. Olapade |
| Seasonal variation of Ralstonia solanocearum biovar 2 populations in a Spanish river: Recovery of stressed cells at low temperatures. | Biological sciences | Edson Bertolini, Maria M. Lopez, Paola Caruso, Josa Luis Palomo, Belen Alvarez, Elena G. Biosca |
| Sec-mediated secretion of bacteriocin enterocin P by Lactococcus lactis. | Biological sciences | Arnold J.M. Driessen, Carmen Herranz |
| Secretion of human serum albumin by Kluyveromyces lactis overexpressing KIPDII and KIEROI.(endoplasmic reticulum oxidoreuction) | Biological sciences | Claudia Donnini, Barbara Neglia, Tiziana Lodi |
| Secretion of recombinant pediocin PA-1 by Bifidobacterium longum, using the signal sequence for Bifidobacterial alpha-amylase. | Biological sciences | Yu-Ryang Pyun, Gi-Seong Moon, Myeong Soo Park, Geun Eog Ji, Wang June Kim |
| Select Listeria monocytogenes subtypes commonly found in foods carry distinct nonsense mutations in inlA, leading to expression of truncated and secreted internalin A, and are associated with a reduced invasion phenotype for human intestinal epithelial cells. | Biological sciences | K.K. Nightingale, M. Wiedmann, K. Windham, K.E. Martin, M. Yeung |
| Selenite and tellurite reduction by Shewanella oneidensis. | Biological sciences | Thierry Heulin, Andre Vermeglio, Agineszka Klonowska |
| Sensitive detection of botulinum neurotoxin types C and D with an immunoaffinity chromatographic column test. | Biological sciences | Frank Gessler, Katrin Hampe, Helge Bohnel |
| Sensitivity of planktonic and biofilm-associated Salmonella spp. to ionizing radiation. | Biological sciences | Brendan A. Niemira, Ethan B. Solomon |
| Sequence and expression analyses of Cytophaga-like hydrolases in a Western Arctic metagenomic library and the Sargasso Sea. | Biological sciences | Matthew T. Cottrell, David L. Kirchman, Liying Yu |
| Sequential reductive dechlorination of meta-chlorinated polychlorinated biphenyl congeners in sediment microcosms by two different Chloroflexi phylotypes. | Biological sciences | Kevin R. Sowers, Harold D. May, Joy E.M. Watts, Sonja K. Fagervold |
| Sheep may not be an important zoonotic reservoir for Cryptosporidium and Giardia parasites. | Biological sciences | Carolyn Read, Una M. Ryan, Caroline Bath, Ian Robertson, Brown Besier, Rebecca Traub, Aileen Elliot, Linda Mcinnes |
| Shewanella oneidensis MR-1 uses overlapping pathways for iron reduction at a distance and by direct contact under conditions relevant for biofilms. | Biological sciences | Andreas Kappler, Dianne K. Newman, Maria E. Hernandez, Douglas P. Lies, Randall E. Mielke, Jeffrey A. Gralnick |
| Shifts in rhizoplane communities of aquatic plants after cadmium exposure. | Biological sciences | Lisa M. Stout, Klaus Nusslein |
| Shiga toxin 2e-producing Escherichia coli isolates from humans and pigs differ in their virulence profiles and interactions with intestinal epithelial cells. | Biological sciences | Lothar H. Wieler, Helge Karch, M. Alexander Schmidt, Martina Bielaszewska, Anne-Katharina Sonntag, Alexander Mellmann, Nadine Dierksen, Peter Schierack |
| Signal transduction by Tga3, a novel G protein alpha subunit of Trichoderma atroviride. | Biological sciences | Robert L. Mach, Matteo Lorito, Susanne Zeilinger, Barbara Reithner, Valeria Scala, Isabel Peissl |
| Signature-tagged transposon mutagenesis studies demonstrate the dynamic nature of cecal colonization of 2-week-old chickens by Campylobacter jejuni. | Biological sciences | Michael A. Jones, Paul A. Barrow, Claire A. Woodall, Andrew J. Grant, Christopher Coward, Duncan J. Maskeli |
| Simple colorimetric method for detecting degenerate strains of the cultivated basidiomycete Flammulina velutipes (Enokitake). | Biological sciences | Yumi Magae, Kobun Akahane, Kimiyoshi Nakamura, Shigeyuki Tsunoda |
| Simultaneous display of multiple foreign peptides in the FliD capping and FliC filament proteins of the Escherichia coli flagellum. | Biological sciences | Timo K. Korhonen, Benita Westerlund-Wikstrom, Katariina Majander |
| Simultaneous recovery of extracellular and intracellular DNA suitable for molecular studies from Marine sediments. | Biological sciences | Roberto Danovaro, Cinzia Corinaldesi, Antonio Dell'Anno |
| Single-nucleotide polymorphism phylotyping of Escherichia coli. | Biological sciences | Erick Denamur, Cecile Acquaviva, Patricia Escobar-Paramo, Florence Hommais, Sabrina Pereira |
| Single-site oxidation, cysteine 108 to cysteine sulfinic acid, in D-amino acid oxidase from Trigonopsis variabilis and its structural and functional consequences. | Biological sciences | Bernd Nidetzky, Anita Slavica, Iskandar Dib |
| Soil microbial community responses to additions of organic carbon substrates and heavy metals (Pb and Cr). | Biological sciences | Cindy H. Nakatsu, Nadia Carmosini, Brett Baldwin, Federico Beasley, Peter Kourtev, Allan Konopka |
| Source bioaerosal concentration and rRNA gene-based identification of microorganisms aerosolized at a flood irrigation wastewater reuse site. | Biological sciences | Jordan Peccia, Tania Paez-Rubio, Emily Viau, Socorro Romero-Hernandez |
| Spatial distribution and transcriptional activity of an uncultured clade of planktonic diazotrophic gamma-proteobacteria in the Arabian Sea. | Biological sciences | Michael Wyman, Anthony G. O'Donnell, Clare Bird, Joaquin Martinez Martinez |
| Spatially resolved characterization of biogenic manganese oxide production within a bacterial biofilm. | Biological sciences | Garrison Sposito, Brandy Toner, Sirine Fakra, Mario Villalobos, Tony Warwick |
| Spatial organization of dual-species bacterial aggregates onleaf surfaces. | Biological sciences | S.E. Lindow, J.-M Monier |
| Speciation of Campylobacter coli, C. jejuni, C. helveticus, C. lari, C. sputorum, and C. upsaliensis by matrix-assisted laser desorption ionization-time of flight mass spectrometry. | Biological sciences | Robert E. Mandrell, William G. Miller, Clifton K. Fagerquist, Leslie A. Harden, Anna Bates, William F. Haddon |
| Species abundance and diversity of Burkholderia cepacia complex in the environment. | Biological sciences | James M. Tiedje, John J. LiPuma, Alban Ramette |
| Specific detection, isolation, and characterization of selected, previously uncultured members of the freshwater bacterioplankton community. | Biological sciences | Jorg Overmann, Alke Bruns, Frederic Gich, Karin Schubert, Herbert Hoffelner |
| Specificity of a bacteroides thetaiotaomicron marker for human feces. | Biological sciences | C. Andrew Carson, Jessica M. Christiansen, Helen Yampara-Iquise, Verel W. Benson, Claire Baffaut, Jerri V. Davis, Robert R. Broz, Wendi M. Rogers, William H. Fales |
| Stable coexistence of five bacterial strains as a cellulose-degrading community. | Biological sciences | Shin Haruta, Masaharu Ishii, Yasuo Igarashi, Souichiro Kato, Zong Jun Cui |
| Stable-isotope probing of bacteria capable of degrading salicylate, naphthalene, or phenanthrene in a bioreactor treating contaminated soil. | Biological sciences | Michael D. Aitken, Avram Gold, Ramiah Sangaiah, Louise M. Ball, David R. Singleton, Sabrina N. Powell |
| Stable isotopic studies of n-alkane metabolism by a sulfate-reducing bacterial enrichment culture. | Biological sciences | Kevin G. Kropp, Irene A. Davidova, Lisa M. Gieg, Mark Nanny, Joseph M. Suftila |
| Starch-binding domain affects catalysis in two Lactobacillus alpha-amylases. | Biological sciences | J.P. Guyot, R. Rodriguez-Sanoja, B. Ruiz, S. Sanchez |
| Starvation response of Saccharomyces cerevisiae grown in anaerobic nitrogen- or Carbon- limited chemostat cultures. | Biological sciences | Elisabeth Thomsson, Christer Larsson, Lena Gustafsson |
| Statistical analyses: Possible reasons for unreliability of source tracking efforts. | Biological sciences | Clarivel Lasalde, Roberto Rodriguez, Gary A. Toranzos |
| Strain- and genotype-specific differences in virulence of Paenibacillus larvae subsp. larvae, a bacterial pathogen causing American foulbrood disease in honeybees. | Biological sciences | Elke Genersch, Ainura Ashiralieva, Ingemar Fries |
| Structural characterization of glucooligosaccharide oxidase from Acremonium strictum. | Biological sciences | Ying-Chieh Tsai, Shwu-Huey Liaw, Meng-Hwan Lee, Wen-Lin Lai, Shuen-Fuh Lin, Cheng-Sheng Hsu |
| Structure and biosynthesis of the BT peptide antibiotic from Brevibacillus texasporus. | Biological sciences | Xiaofeng Wu, Jonathan Ballard, Yi Wei Jiang |
| Structure and sequence conservation of hao cluster genes of autotrophic ammonia-oxidizing bacteria: Evidence for their evolutionary history . | Biological sciences | Alan B. Hooper, David J. Bergmann, Martin G. Koltz |
| Structure and topology of microbial communities in the major gut compartments of Melolontha melolontha larvae (Coleoptera: Scarabaeidae). | Biological sciences | Andreas Brune, Michael W. Friedrich, Markus Egert, Ulrich Stingl, Bianca Pommerenke, Lars Dyhrberg Bruun |
| Structure of sediment-associated microbial communities along a heavy-metal contamination gradient in the marine environment. | Biological sciences | David C. Gillan, Bruno Danis, Philippe Pernet, Guillemette Joly, Philippe Dubois |
| Study of adhesion and survival of lactobacilli and bifidobacteria on table olives with the aim of formulating a new probiotic food. | Biological sciences | Paola Lavermicocca, Francesca Valerio, Maria De Angelis, Maria Luisa Callegari, Angelo Visconti, Stella Lisa Lonigro, Lorenzo Morelli, Carlo G. Rizzello |
| Study of Spanish grape mycobiota and ochratoxin A production by isolates of Aspergillus tubingensis and other members of Aspergillus section nigri. | Biological sciences | Angel Medina, Rufino Mateo, Laura Lopez-Ocana, Francisco Manuel Valle-Algarra, Misericordia Jimenez |
| Substrate specificity and colorimetric assay for recombinant TrzN derived from Arthrobacter aurescens TC1. | Biological sciences | Michael J. Sadowsky, Lawrence P. Wackett, Gilbert Johnson, Nir Shapir, Charlotte Rosendahl, Marco Andreina |
| Subsurface microbial methanotrophic mats in the Black Sea. | Biological sciences | Antje Boetius, Katrin Knittel, Tina Treude, Martin Blumenberg, Richard Seifert |
| Subtle difference between benzene and toluene dioxygenases of Pseudomonas putida. | Biological sciences | Claire Bagneris, Richard Cammack, Jeremy R. Mason |
| Succession of internal sulfur cycles and sulfur-oxidizing bacterial communities in microaerophilic wastewater biofilms. | Biological sciences | Tsukasa Ito, Satoshi Okabe, Kenichi Sugita, Hisashi Satoh |
| Suicide polymerase endonuclease restriction, a novel technique for enhancing PCR amplification of minor DNA templates.(polymerase chain reaction) | Biological sciences | Dror Minz, Stefan J. Green |
| Suitability of recombinant Escherichia coli and Pseudomonas putida strains for selective biotransformation of m-nitrotoluene by xylene monooxygenase. | Biological sciences | Bernard Witholt, Andreas Schmid, Daniel Meyer |
| Sulfate-reducing bacteria in floating macrophyte rhizospheres from an Amazonian floodplain lake in Bolivia and their association with Hg methylation. | Biological sciences | Dario Acha, Volga Iniguez, Marc Roulet, Jean Remy Davee Guimaraes, Ruddy Luna, Lucia Alanoca, Samanta Sanchez |
| (super 13)C-carrier DNA shortens the incubation time needed to detect benzoate-utilizing denitrifying bacteria by stable-isotope probing. | Biological sciences | L.Y. Young, E. Gallagher, L. McGuinness, C. Phelps, L.J. Kerkhot |
| (super 13)C incorporation into signature fatty acids as an assay for carbon allocation in arbuscular mycorrhiza. | Biological sciences | Ingrid M. van Aarle, Pal Axel Olsson, Goran Bengtsson, Mayra E. Gavito, Per Bengtson |
| (super 1)H nuclear magnetic resonance spectroscopy-based studies of the metabolism of food-borne carcinogen 2-amino-3-methylimidazol[4,5-f]quinoline by human intestinal microbiota. | Biological sciences | Anne-Marie Delort, Christele Humblot, Bruno Cumbourieu, Marja-Lisa Vaisanen, Jean-Pierre Furet, Sylvie Rabot |
| Suppressive subtractive hybridization of and differences in gene expression content of calcifying and noncalcifying cultures of Emiliania huxleyi strain 1516. | Biological sciences | Binh Nguyen, Betsy A. Read, Thomas M. Wahlund, Robert M. Bowers |
| Surface attachment of Listeria monocytogenes is induced by sublethal concentrations of alcohol at low temperatures. | Biological sciences | Anne Gravesen, Susanne Knochel, Charidimos Lekkas |
| Surface display of recombinant proteins on Bacillus thuringiensis spores. | Biological sciences | Kenneth W. Nickerson, Cheng Du, Wing C. Chan, Timothy W. McKiethan |
| Surface microflora of four smear-ripened cheeses. | Biological sciences | Gerald F. Fitzgerald, Siegfried Scherer, Jean Swings, Marc Vancanneyt, Jerome Mounier, Timothy M. Cogan, Roberto Gelsomino, Stefanie Goerges, Katrien Vandemeulebroecke, Bart Hoste |
| Surface plasmon resonance imaging-based protein array chip system for monitoring a hexahistidine-tagged protein during expression and purification. | Biological sciences | Jae Sung Lee, Hyeon-Su Ro, Sun Ok Jung, Byung Hoon Kho, Hyung Pyo Hong, Yong-Beom Shin, Min Gon Kim, Bong Hyun Chung |
| Survey of extreme solvent tolerance in gram-positive cocci: Membrane fatty acid changes in Staphylococcus haemolyticus grown in toluene. | Biological sciences | Dana R. Kadavy, Kenneth W. Nickerson, Lindsey E. Nielsen, Soumitra Rajagopal, Rhae Drijber |
| Survival of Campylobacter jejuni in waterborne protozoa. | Biological sciences | W.J. Snelling, J.P. McKenna, D.M. Lecky, J.S.G. Dooley |
| Survival of Campylobacter jejuni in water: Effect of grazing by the freshwater crustacean Daphnia carinata (Cladocera). | Biological sciences | M. Schallenberg, P.J. Bremer, S. Henkel, A. Launhardt, C.W. Burns |
| Survival of genetically modified and self-cloned strains of commercial baker's yeast in simulated natural environments: Environmental risk assessment. | Biological sciences | Akira Ando, Chise Suzuki, Jun Shima |
| Survival of Mycobacterium avium subsp. paratuberculosis in dam water and sediment. | Biological sciences | Leslie A. Reddacliff, Ian B. Marsh, Ricahrd J. Whittington |
| Survival of probiotic lactobacilli in acidic environments is enhanced in the presence of metabolizable sugars. | Biological sciences | G.F. Fitzgerald, C. Stanton, R. P. Ross, B. M. Corcoran |
| Survival of spacecraft-associated microorganisms under simulated Martian UV irradiation. | Biological sciences | Kasthuri Venkateswaran, David A. Newcombe, Andrew C. Schuerger, James N. Benardini, Danielle Dickinson, Roger Tanner |
| Survival or growth of Escherichia coli O157:H7 in a model system of fresh meat decontamination runoff waste fluids and its resistance to subsequent lactic acid stress. | Biological sciences | John Samelis, John N. Sofos, Patricia A. Kendall, Gary C. Smith |
| Symbiosis and insect diversification: An ancient symbiont of sap-feeding insects from the bacterial phylum Bacteroidetes. | Biological sciences | Nancy A. Moran, Phat Tran, Nicole M. Gerardo |
| Symbiotic fungi produce laccases potentially involved in phenol degradation in fungus combs of fungus-growing termites in Thailand. | Biological sciences | Toshiaki Kudo, Napavarn Noparatnaraporn, Shigeharu Moriya, Savitr Trakulnaleamsai, Moriya Ohkuma, Yaovapa Taprab, Toru Johjima, Yoshimasa Maeda |
| Symbiotic hydrogenase activity in Bradyrhizobium sp. (Vigna) increases nitrogen content in Vigna unguiculata plants. | Biological sciences | Belen Brito, Juan Imperial, Tomas Ruiz-Argueso, Cecilia Baginsky, Jose M. Palacios |
| Temperature-driven campylobacter seasonality in England and Wales. | Biological sciences | Estelle Russek-Cohen, Valerie R. Louis, Iain A. Gillespie, Sarah J. O'Brien, Andrew D. Pearson, Rita R. Cowell |
| Temporal patterns of nitrogenase gene (nifH) expression in the oligotrophic North Pacific Ocean. | Biological sciences | Jonathan P. Zehr, David M. Karl, Bethany D. Jenkins, Mathew J. Church, Cindy M. Short |
| Tetracycline-dependent conditional gene knockout in Bacillus subtilis. | Biological sciences | Wolfgang Hillen, Annette Kamionka, Ralph Bertram |
| The doubly phosphorylated form of HPr, HPr(Ser-P)(His~P), is abundant in exponentially growing cells of Streptococcus thermophilus and phosphorylates the Lactose transporter LacS as efficiently as HPr(His~P). | Biological sciences | Denis Roy, Christian Vadeboncoeur, Michel Frenette, Sylvain Moineau, Armelle Cochu, Katy Vaillancourt, Jean-Dominique LeMay, Israel Casabon |
| The gene yggE functions in restoring physiological defects of Escherichia coli cultivated under oxidative stress conditions. | Biological sciences | Shuhei Hayashi, Takeshi Kobayashi, Hiroyuki Honda, Sun Young Kim, Motomu Nishioka, Masahito Taya |
| The halophilic fungus Hortaea werneckii and the halotolerant fungus aureobasidium pullulans maintain low intracellular cation concentrations in hypersaline environments. | Biological sciences | Jose Ramos, Tina Kogej, Ana Plemenitas, Nina Gunde-Cimerman |
| The HtrA protease of Campylobacter jejuni is required for heat and oxygen tolerance and for optimal interaction with human epithelial cells. | Biological sciences | Hanne Ingmer, Lone Brondsted, Marianne Thorup Andersen, Mary Parker, Kirsten Jorgensen |
| The microcystin composition of the cyanobacterium Plankothrix agardhii changes toward a more toxic variant with increasing light intensity. | Biological sciences | Elke Dittman, Claudia Wiedner, Petra M. Visser, Luuc R. Mur, Jef Huisman, Linda Tonk, Guntram Christiansen, Eveline O.F.M. Snelder |
| Thio wax ester biosynthesis utilizing the unspecific bifunctional wax ester synthase/acyl coenzyme A: Diacylglycerol acyltransferase of Acinetobacter sp. strain ADP1. | Biological sciences | Alexander Steinbuchel, Rainer Kalscheuer, Stefan Uthoff, Tim Stoveken, Nikolaus Weber, Klaus Vosmann, Erika Klein |
| Three stages of a biofilm community developing at the liquid-liquid interface between polychlorinated biphenyls and water. | Biological sciences | Thomas R. Neu, Kenneth N. Timmis, Alexandre Jose Macedo, Ute Kuhlicke, Wolf-Rainer Abraham |
| Timing of induction of osmotically controlled genes in Salmonella enterica serovar Typhimurium, determined with quantitative real-time reverse transcription-PCR. | Biological sciences | Kathleen O'Connor, Jeffrey R. Lucas, Laszlo N. Csonka, Boovaraghan Balaji, Joseph M. Anderson |
| tir- and stx-positive Escherichia coli in stream waters in a metropolitan area. | Biological sciences | Jeffrey S. Karns, Daniel R. Shelton, James A. Higgins, Kenneth T. Belt, Jonathan Russell-Anelli |
| Toward a system of microbial forensics: From sample collection to interpretation of evidence. | Biological sciences | Michael S. Ascher, Jacques Ravel, Claire M. Fraser, Stephen A. Morse, Ranajit Chakraborty, Ronald M. Atlas, John J. Dunn, Bruce Budowle, Terrance J. Leighton, Steven E. Schutzer, David R. Franz, Randal S. Murch, Ronald A. Walters, Daniel L. Rock, Anne C. Walsh, James P. Burans, Thomas R. Slezak, Stephan P. Velsko |
| Toxin-producing ability among Bacillus spp. outside the Bacillus cereus group. | Biological sciences | Rudiger Pukall, Cecilie From, Peter Schumann, Victor Hormazabal, Per Einar Granum |
| Transcriptional activation of quinoline degradation operons of Pseudomonas putida 86 by the AraC/XylS-type regulator OxoS and cross-regulation of the PqorM promoter by XylS. | Biological sciences | Birgit Carl, Susanne Fetzner |
| Transcriptional analysis of genes encoding Shiga toxin 2 and its variants in Escherichia coli. | Biological sciences | Helge Karch, Wenlan Zhang, Martina Bielaszewska, Alexander W. Friedrich, Thorsten Kuczius |
| Transcriptional expression of the tceA gene in a Dehalococcoides-containing microbial enrichment. | Biological sciences | Lisa Alvarez-Cohen, David R. Johnson, Patrick K.H. Lee, Victor F. Holmes, Alexander C. Fortin |
| Transcriptional organization of genes for protocatechuate and quinate degradation from Acinetobacter sp. strain ADP1. | Biological sciences | Sureyya Dal, Gaby Trautwein, Ulrike Gersicher |
| Transcriptional response of Saccharomyces cerevisiae to desiccation and rehydration. | Biological sciences | Malcolm Potts, Richard F. Helm, Jatinder Singh, Deept Kumar, Naren Ramakrishnan, Vibha Singhal, Jody Jervis, James F. Garst, Stephen M. Slaughter, Andrea M. DeSantis |
| Transcriptome analysis of recombinant protein secretion by Aspergillus nidulans and the unfolded-protein response in vivo1. | Biological sciences | Geoffrey D. Robson, Stephen G. Oliver, Karin Lanthaler, Andrew H. Sims, Manda E. Gent, Nigel S. Dunn-Coleman |
| Transcriptome-based identification of the Sinorhizobium meliloti NodD1 regulon. | Biological sciences | Delphine Capela, Sebastien Carrere, Jacques Batut |
| Trichoderma mitogen-activated protein kinase signaling is involved in induction of plant systemic resistance. | Biological sciences | Ilan Chet, Benjamin A. Horwitz, Ada Viterbo, Michal Harel, Prasun K. Mukherjee |
| Trichosporon species isolated from guano samples obtained from bat-inhabited caves in Japan. | Biological sciences | Takashi Sugita, Ken Kikuchi, Koichi Makimura, Yoshimasa Uehara, Kensaku Urata, Masakazu Nimi, Takashi Someya, Katsuhiko Kamei |
| Triphenylmethane reductase from Citrobacter sp. strain KCTC 18061P: Purification, characterization, gene cloning, and overexpression of a functional protein in Escherichia coli. | Biological sciences | Moon-Sun Jang, Young-Mi Lee, Cheorl-Ho Kim, Jai-Heon Lee, Dong-Woo Kang, Seok-Jo Kim, Young-Choon Lee |
| Twin-arginine translocation of active human tissue plasminogen activator in Escherichia coli. | Biological sciences | Jae-Young Kim, Elizabeth A. Fogarty, Franklin J. Lu, Hui Zhu, Geoffrey D. Wheelock, Lee A. Henderson, Matthew P. DeLisa |
| Two alpha(1-3) glucan synthases with different functions in Aspergillus fumigatus. | Biological sciences | S. Park, A. Beauvais, D. Maubon, W. Morelle, M. Tanguy, J.P. Latge, D.S. Perlin, M. Heurre |
| Two novel bacterial biosensors for detection of nitrate availability in the rhizosphere. | Biological sciences | Mary K. Firestone, Steven E. Lindow, Kristen M. DeAngelis, Pingsheng Ji |
| Two rhizobial strains, mesorhizobium loti MAFF303099 and bradyrhizobium japonicum USDA110, encode haloalkane dehalogenases with novel structures and substrate specificities. | Biological sciences | Jiri Damborsky, Kiwamu Minamisawa, Yuji Nagata, Zbynek Prokop, Marta Monincova, Masataka Tsuda, Yoshiyuki Ohtsubo, Yukari Sato, Radka Chaloupkova |
| Two tsetse fly species, Glossina palpalis gambiensis and Glossina morsitans morsitans, carry genetically distinct populations of the secondary symbiont Sodalis glossinidius. | Biological sciences | Roger Frutos, Anne Geiger, Gerard Cuny |
| Unexpectedly high bacterial diversity in arctic tundra relative to boreal forest soils, revealed by serial analysis of ribosomal sequence tags. | Biological sciences | William W. Mohn, Josh D. Neufeld |
| UniFrac: A new phylogenetic method for comparing microbial communities. | Biological sciences | Catherine Lozupone, Rob Knight |
| Unique kinetic properties of phenol-degrading Variovorax strains responsible for efficient trichloroethylene degradation in a chemostat enrichment culture. | Biological sciences | Akira Hiraishi, Kazuya Watanabe, Hiroyuki Futamata, Yayoi Nagano |
| Unveiling of novel radiations within Trichodesmium cluster by hetR gene sequence analysis. | Biological sciences | Birgitta Bergman, Pernilla Lundgren, Sven Janson, Sara Jonasson, Alon Singer |
| Uptake of CdSe and CdSe/ZnS quantum dots into bacteria via purine-dependent mechanisms. | Biological sciences | J.A. Kloepfer, R.E. Mielke, J.L. Nadeau |
| Use of 16S rRNA gene terminal restriction fragment analysis to assess the impact of solids retention time on the bacterial diversity of activated sludge. | Biological sciences | Daniel B. Oerther, Pascal E. Saikaly, Peter G. Stroot |
| Use of a quartz crystal microbalance to investigate the antiadhesive potential of N-acetyl-L-cysteine. | Biological sciences | Ann-Cathrin Olofsson, Malte Hermansson, Hans Elwing |
| Use of artificial neural networks to accurately identify Cryptosporidium oocyst and Giardia cyst images. | Biological sciences | Suresh D. Pillai, Kenneth W. Widmer, Deepak Srikumar |
| Use of a tetracycline-inducible system for conditional expression in Mycobacterium tuberculosis and Mycobacterium smegmatis. | Biological sciences | Tanya Parish, Paul Carroll, D.G. Niranjala Muttucumaru |
| Use of enrichment culture for directed evolution of the Vibrio fluvialis JS17 (1)-transaminase, which is resistant to product inhibition by aliphatic ketones. | Biological sciences | Byung-Gee Kim, Hyungdon Yun, Bum-Yeol Hwang, Jae-Hun Lee |
| Use of ethidium monoazide and PCR in combination for quantification of viable and dead cells in complex samples. | Biological sciences | Knut Rudi, Askild L. Holck, Birgitte Moen, Signe Marie Dromtorp |
| Use of field-based stable isotope probing to identity adapted populations and track carbon flow through a phenol-degrading soil microbial community. | Biological sciences | Eugene L. Madsen, Christopher M. DeRito, Graham M. Pumphrey |
| Use of fluorophore-conjugated lectins to study cell-cell interactions in model marine biofilms. | Biological sciences | Barbara Wigglesworth-Cooksey, Keith E. Cooksey |
| Use of glnQ as a counterselectable marker for creation of allelic exchange mutation in group B streptococci. | Biological sciences | Glen S. Tamura, Debra S. Bratt, Harry H. Yim, Aphakorn Nittayajarn |
| Use of gradient plates to study combined effects of temperature, pH, and NaCl concentration on growth of Monascus ruber van Tieghem, an ascomycetes fungus isolated from green table olives. | Biological sciences | E.Z. Panagou, P.N. Skandamis, G.-J.E. Nychas |
| Use of microarrays with different probe sizes for monitoring gene expression. | Biological sciences | Matthew W. Fields, Jizhong Zhou, Liyou Wu, Zhili He |
| Use of plant growth-promoting bacteria for biocontrol of plant diseases: Principles, mechanisms of action, and future prospects. | Biological sciences | Brion Duffy, Stephane Compant, Jerzy Nowak, Christophe Clement, Essaid Ait Barka |
| Use of random and saturation mutageneses to improve the properties of Thermus aquaticus amylomaltase for efficient production of cycloamyloses. | Biological sciences | Jiro Shimada, Hiroki Kaneko, Takashi Kuriki, Yoshinobu Terada, Takeshi Takaha, Kazutoshi Fujii, Hirotaka Minagawa |
| Use of rotavirus-like particles as surrogates to evaluate virus persistence in shellfish. | Biological sciences | Robert L. Atmar, Jean Cohen, Fabienne Loisy, Francoise S. Le Guyader, Monique Pommepuy, Jean-Claude Le Saux, Marie-Paule Caprais |
| Use of Saccharomyces cerevisiae BLYES expressing bacterial bioluminescence for rapid, sensitive detection of estrogenic compounds. | Biological sciences | Gary S. Sayler, Alice C. Layton, John Sanseverino, Michael L. Simpson, Rakesh K. Gupta, Stacey S. Patterson, Steven A. Ripp, Leslie Saidak, T. Wayne Schultz |
| Use of stochastic models to assess the effect of environmental factors on microbial growth. | Biological sciences | Larry J. Forney, Paul Joyce, Ronald L. Crawford, Jose Migue Ponciano, Frederik P.J. Vandecasteele, Thomas F. Hess |
| Utilization of fluorescent microspheres and a green fluorescent protein-marked strain for assessment of microbiological contamination of permafrost and ground ice core samples from the Canadian High Arctic. | Biological sciences | C.P. McKay, D.F. Juck, G. Whissell, B. Steven, W. Pollard, C.W. Greer, L.G. Whyte |
| Utilization of the plant hormone indole-3-acetic acid for growth by Pseudomonas putida strain 1290. | Biological sciences | Steven E. Lindow, Johan H.J. Leveau |
| UV inactivation of Cryptosporidum hominis as measured in cell culture. | Biological sciences | Giovanni Widmer, Anne M. Johnson, Karl Linden, Kristina M. Ciociola, Ricardo De Leon, Paul A. Rochelle |
| Validation of a flour-free model dough system for throughput studies of baker's yeast. | Biological sciences | Joaquin Panadero, Francisca Randez-Gil, Jose Antonio Prieto |
| Validity of the indicator organism paradigm for pathogen reduction in reclaimed water and public health protection. | Biological sciences | Jerzy Lukasik, Troy M. Scott, Samuel R. Farrah, Valerie J. Harwood, Joan B. Rose, Audrey D. Levine, Vasanta Chivukula |
| Variation in 16S-23S rRNA intergenic spacer regions in Photobacterium damselae: A mosaic-like structure. | Biological sciences | Carlos R. Osorio, Matthew Collins D., Jesus L. Romalde, Alicia E. Toranzo |
| Variation in acid resistance among Shiga toxin producing clones of pathogenic Escherichia coli. | Biological sciences | Thomas S. Whittam, Teresa M. Large, Seth T. Walk |
| Versatile use of oriC plasmids for functional genomics of Mycoplasma capricolum subsp. capricolum. | Biological sciences | Joachim Frey, Alain Blanchard, Carole Janis, Carole Lartigue, Henri Wroblewski, Francois Thiaucourt, Pascal Sirand-Pugnet |
| Vertical and seasonal variations of bacterioplankton subgroups with different nucleic acid contents: Possible regulation by phosphorus. | Biological sciences | Toshi Nagata, Yoko Nishimura, Chulgoo Kim |
| Vertical distribution of the free-living amoeba population in soil under desert shrubs in the Negev Desert, Israel. | Biological sciences | Salvador Rodriguez-Zaragoza, Einav Mayzlish, Yosef Steinberger |
| Viable Blastocystis cysts in Scottish and Malaysian sewage samples. | Biological sciences | H.V. Smith, K. Suresh, T.C. Tan |
| Viral production, decay rates, and life strategies along a trophic gradient in the North Adriatic Sea. | Biological sciences | Roberto Danovaro, Rachel Noble, Lucia Bongiorni, Mirko Magagnini, Monica Armeni |
| Viscoelasticity of Staphylococcus aureus biofilms in response to fluid shear allows resistance to detachment and facilitates rolling migration. | Biological sciences | Paul Stoodley, Cory J. Rupp, Christoph A. Fux |
| Visualization and detection of infectious coxsackievirus replication using a combined cell culture-molecular beacon assay. | Biological sciences | Wilfred Chen, Ashok Mulchandani, Marylynn V. Yates, Andre M. Salazar, Aijun Wang |
| Visualization and enumeration of bacteria carrying a specific gene sequence by in situ rolling circle amplification. | Biological sciences | Nobuyasu Yamaguchi, Masao Nasu, Fumito Maruyama, Takehiko Kenzaka, Katsuji Tani |
| Waterborne pathogen detection by use of oligonucleotide-based microarrays. | Biological sciences | Karine Lemarchand, Luke Masson, Josee Harel, Roland Brousseau, Pierre Payment, Christine Maynard, Frederic Berthiaume, Paul Bayardelie |
| Web-type evolution of Rhodococcus gene clusters associated with utilization of naphthalene. | Biological sciences | Michael J. Larkin, Leonid A. Kulakov, Shenchang Chen, Christopher C.R. Allen |
| When coupled to natural transformation in Acinetobacter sp. strain ADP1, PCR mutagenesis is made less random by mismatch repair. | Biological sciences | Alison Buchan, L. Nicholas Ornston |
| Whole-genome shotgun optical mapping of Rhodospirillum rubrum. | Biological sciences | Alex Lim, David C. Schwartz, Alla Lapidus, Susan Reslewic, Shiguo Zhou, Mike Plac, Taoping Zhang, Adam Briska, Goldstein, Chris Chras, Runnheim, Dan Forrst, Cliff S Han, Gary P Roberts |
| Xanthomonas axonopodis pv. phaseoli var. fuscans is aggregated in stable biofilm population sizes in the phyllosphere of field-grown beans. | Biological sciences | M. -A. Jacques, K. Josi, A. Darrasse, R. Samson |
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